Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | ACEPPU_RS27160 | Genome accession | NZ_CP169254 |
| Coordinates | 5134451..5134813 (-) | Length | 120 a.a. |
| NCBI ID | WP_374187510.1 | Uniprot ID | - |
| Organism | Priestia aryabhattai strain YB01 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5129451..5139813
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPPU_RS27150 (ACEPPU_27150) | - | 5129938..5132568 (+) | 2631 | WP_374187509.1 | DEAD/DEAH box helicase | - |
| ACEPPU_RS27155 (ACEPPU_27155) | - | 5132867..5133913 (+) | 1047 | WP_063670706.1 | LysM peptidoglycan-binding domain-containing protein | - |
| ACEPPU_RS27160 (ACEPPU_27160) | ssbB | 5134451..5134813 (-) | 363 | WP_374187510.1 | single-stranded DNA-binding protein | Machinery gene |
| ACEPPU_RS27165 (ACEPPU_27165) | - | 5134910..5135347 (+) | 438 | WP_014457773.1 | YwpF-like family protein | - |
| ACEPPU_RS27170 (ACEPPU_27170) | - | 5135871..5136293 (+) | 423 | WP_013059787.1 | helix-turn-helix domain-containing protein | - |
| ACEPPU_RS27175 (ACEPPU_27175) | fabZ | 5136322..5136756 (-) | 435 | WP_013059788.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACEPPU_RS27180 (ACEPPU_27180) | - | 5136840..5137661 (-) | 822 | WP_013059789.1 | flagellar hook-basal body protein | - |
| ACEPPU_RS27185 (ACEPPU_27185) | - | 5137685..5138509 (-) | 825 | WP_013059790.1 | flagellar hook-basal body protein | - |
| ACEPPU_RS27190 (ACEPPU_27190) | - | 5138624..5139625 (-) | 1002 | WP_013059791.1 | rod shape-determining protein | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13458.17 Da Isoelectric Point: 7.1647
>NTDB_id=1050009 ACEPPU_RS27160 WP_374187510.1 5134451..5134813(-) (ssbB) [Priestia aryabhattai strain YB01]
MINHIILVGRLTKKPELRYTHEGIAVSTITLAINRTFRNAEGEYDADFVNITLWRKNAENTAAYCDKGAVVGVVGRVQTR
TFENNLQQRVYMTDVVADAVKFLSGKPSGFSSFDSNQQEE
MINHIILVGRLTKKPELRYTHEGIAVSTITLAINRTFRNAEGEYDADFVNITLWRKNAENTAAYCDKGAVVGVVGRVQTR
TFENNLQQRVYMTDVVADAVKFLSGKPSGFSSFDSNQQEE
Nucleotide
Download Length: 363 bp
>NTDB_id=1050009 ACEPPU_RS27160 WP_374187510.1 5134451..5134813(-) (ssbB) [Priestia aryabhattai strain YB01]
ATGATTAACCATATTATTCTTGTAGGAAGACTGACAAAAAAACCTGAGCTTCGATATACCCATGAAGGGATTGCAGTATC
TACTATTACTTTAGCAATTAATCGAACGTTTCGAAATGCTGAAGGTGAATATGATGCTGATTTTGTCAACATTACTCTGT
GGAGAAAAAATGCAGAAAATACGGCTGCTTACTGTGATAAAGGAGCGGTTGTAGGTGTGGTAGGGCGTGTACAAACGCGC
ACATTTGAAAATAATCTTCAGCAAAGAGTATATATGACCGACGTTGTGGCTGATGCTGTTAAGTTTTTAAGTGGAAAGCC
ATCCGGTTTTTCTTCATTTGATTCAAATCAACAAGAAGAATAA
ATGATTAACCATATTATTCTTGTAGGAAGACTGACAAAAAAACCTGAGCTTCGATATACCCATGAAGGGATTGCAGTATC
TACTATTACTTTAGCAATTAATCGAACGTTTCGAAATGCTGAAGGTGAATATGATGCTGATTTTGTCAACATTACTCTGT
GGAGAAAAAATGCAGAAAATACGGCTGCTTACTGTGATAAAGGAGCGGTTGTAGGTGTGGTAGGGCGTGTACAAACGCGC
ACATTTGAAAATAATCTTCAGCAAAGAGTATATATGACCGACGTTGTGGCTGATGCTGTTAAGTTTTTAAGTGGAAAGCC
ATCCGGTTTTTCTTCATTTGATTCAAATCAACAAGAAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
60.748 |
89.167 |
0.542 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
88.333 |
0.5 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
52.83 |
88.333 |
0.467 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
41.509 |
88.333 |
0.367 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
41.509 |
88.333 |
0.367 |