Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACEPM2_RS02865 | Genome accession | NZ_CP168735 |
| Coordinates | 604058..604564 (+) | Length | 168 a.a. |
| NCBI ID | WP_011000517.1 | Uniprot ID | Q8Y1X9 |
| Organism | Ralstonia pseudosolanacearum strain RUN3223 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 599058..609564
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPM2_RS02840 (ACEPM2_02840) | - | 599403..600029 (+) | 627 | WP_011000512.1 | DUF2889 domain-containing protein | - |
| ACEPM2_RS02845 (ACEPM2_02845) | sucC | 600096..601262 (+) | 1167 | WP_011000513.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| ACEPM2_RS02850 (ACEPM2_02850) | sucD | 601347..602228 (+) | 882 | WP_011000514.1 | succinate--CoA ligase subunit alpha | - |
| ACEPM2_RS02855 (ACEPM2_02855) | - | 602378..603076 (+) | 699 | WP_011000515.1 | TerC family protein | - |
| ACEPM2_RS02860 (ACEPM2_02860) | pilA | 603270..603791 (+) | 522 | WP_011000516.1 | pilin | Machinery gene |
| ACEPM2_RS02865 (ACEPM2_02865) | pilA | 604058..604564 (+) | 507 | WP_011000517.1 | pilin | Machinery gene |
| ACEPM2_RS02870 (ACEPM2_02870) | - | 604646..606379 (+) | 1734 | WP_043876542.1 | PglL family O-oligosaccharyltransferase | - |
| ACEPM2_RS02875 (ACEPM2_02875) | moaC | 606608..607084 (-) | 477 | WP_011000519.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| ACEPM2_RS02880 (ACEPM2_02880) | - | 607178..608863 (+) | 1686 | WP_011000520.1 | M48 family metallopeptidase | - |
| ACEPM2_RS02885 (ACEPM2_02885) | - | 608878..609465 (-) | 588 | WP_011000521.1 | DUF2946 family protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 17053.72 Da Isoelectric Point: 9.9749
>NTDB_id=1045404 ACEPM2_RS02865 WP_011000517.1 604058..604564(+) (pilA) [Ralstonia pseudosolanacearum strain RUN3223]
MKSMRHLNKRVQKGFTLIELMIVVAIVGILAAIAIPAYQDYTVRARVTEGLSLAAQAKALVSENAANAQSDLSVGSSVFT
PTKNVANLTIAGTGTVPGQITVTYTTAAGGGTLALVPTAAGTALPVSSAPSGPIMWTCYAQNKAQAASSVAPSGTMSLAA
KYAPAECR
MKSMRHLNKRVQKGFTLIELMIVVAIVGILAAIAIPAYQDYTVRARVTEGLSLAAQAKALVSENAANAQSDLSVGSSVFT
PTKNVANLTIAGTGTVPGQITVTYTTAAGGGTLALVPTAAGTALPVSSAPSGPIMWTCYAQNKAQAASSVAPSGTMSLAA
KYAPAECR
Nucleotide
Download Length: 507 bp
>NTDB_id=1045404 ACEPM2_RS02865 WP_011000517.1 604058..604564(+) (pilA) [Ralstonia pseudosolanacearum strain RUN3223]
ATGAAGTCGATGCGTCATCTCAACAAGCGTGTCCAGAAGGGTTTCACGCTGATCGAACTGATGATCGTGGTCGCGATCGT
CGGTATTCTGGCTGCGATTGCCATTCCGGCCTATCAGGACTACACGGTTCGTGCACGCGTGACGGAAGGTCTGTCGCTGG
CTGCGCAAGCCAAGGCGCTGGTGTCGGAAAACGCTGCCAATGCACAGTCTGACCTGTCGGTGGGTTCGTCGGTGTTCACG
CCCACCAAGAACGTTGCCAACTTGACGATTGCTGGTACGGGTACTGTTCCGGGTCAGATCACCGTCACCTATACGACGGC
AGCTGGCGGCGGCACGCTGGCTCTGGTTCCGACTGCGGCTGGTACTGCACTGCCGGTTAGCTCGGCACCGTCGGGCCCGA
TCATGTGGACCTGCTACGCTCAGAATAAGGCTCAGGCTGCTAGCAGCGTTGCTCCGAGCGGTACGATGTCGCTGGCAGCG
AAGTATGCTCCGGCAGAATGCCGCTAA
ATGAAGTCGATGCGTCATCTCAACAAGCGTGTCCAGAAGGGTTTCACGCTGATCGAACTGATGATCGTGGTCGCGATCGT
CGGTATTCTGGCTGCGATTGCCATTCCGGCCTATCAGGACTACACGGTTCGTGCACGCGTGACGGAAGGTCTGTCGCTGG
CTGCGCAAGCCAAGGCGCTGGTGTCGGAAAACGCTGCCAATGCACAGTCTGACCTGTCGGTGGGTTCGTCGGTGTTCACG
CCCACCAAGAACGTTGCCAACTTGACGATTGCTGGTACGGGTACTGTTCCGGGTCAGATCACCGTCACCTATACGACGGC
AGCTGGCGGCGGCACGCTGGCTCTGGTTCCGACTGCGGCTGGTACTGCACTGCCGGTTAGCTCGGCACCGTCGGGCCCGA
TCATGTGGACCTGCTACGCTCAGAATAAGGCTCAGGCTGCTAGCAGCGTTGCTCCGAGCGGTACGATGTCGCTGGCAGCG
AAGTATGCTCCGGCAGAATGCCGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
100 |
100 |
1 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
50.311 |
95.833 |
0.482 |
| pilA2 | Legionella pneumophila str. Paris |
49.689 |
95.833 |
0.476 |
| comP | Acinetobacter baylyi ADP1 |
44.444 |
100 |
0.452 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
36.082 |
100 |
0.417 |