Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | QSK41_RS08000 | Genome accession | NZ_OX638701 |
| Coordinates | 1725605..1725970 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain 4782MK isolate 4782MK | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1720605..1730970
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QSK41_RS07970 (PAER4782_07975) | pyrR | 1721227..1721739 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| QSK41_RS07975 (PAER4782_07980) | ruvX | 1721851..1722285 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| QSK41_RS07980 (PAER4782_07985) | - | 1722285..1722854 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| QSK41_RS07985 (PAER4782_07990) | - | 1722903..1723796 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| QSK41_RS07990 (PAER4782_07995) | gshB | 1723943..1724896 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| QSK41_RS07995 (PAER4782_08000) | pilG | 1725151..1725558 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| QSK41_RS08000 (PAER4782_08005) | pilH | 1725605..1725970 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| QSK41_RS08005 (PAER4782_08010) | - | 1726021..1726557 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| QSK41_RS08010 (PAER4782_08015) | pilJ | 1726642..1728690 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| QSK41_RS08015 (PAER4782_08020) | pilK | 1728751..1729626 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=1045404 QSK41_RS08000 WP_003084587.1 1725605..1725970(+) (pilH) [Pseudomonas aeruginosa strain 4782MK isolate 4782MK]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=1045404 QSK41_RS08000 WP_003084587.1 1725605..1725970(+) (pilH) [Pseudomonas aeruginosa strain 4782MK isolate 4782MK]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |