Detailed information NTG1044458

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACEN8Q_RS21355
• Genome accession: NZ_CP168522
• Coordinates: 4713908..4714972 (-)
• Length: 354 a.a.
• NCBI ID: WP_413703709.1
• Uniprot ID: -
• Organism: Pseudomonas sp. Pseusp16 strain CT11-16
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4708908..4719972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEN8Q_RS21330 (ACEN8Q_21320)	aroK	4709592..4710110 (-)	519	WP_015093141.1	shikimate kinase AroK	-
ACEN8Q_RS21335 (ACEN8Q_21325)	pilQ	4710115..4712184 (-)	2070	WP_413703706.1	type IV pilus secretin PilQ	Machinery gene
ACEN8Q_RS21340 (ACEN8Q_21330)	-	4712198..4712725 (-)	528	WP_413703707.1	pilus assembly protein PilP	-
ACEN8Q_RS21345 (ACEN8Q_21335)	pilO	4712722..4713345 (-)	624	WP_413703708.1	type 4a pilus biogenesis protein PilO	-
ACEN8Q_RS21350 (ACEN8Q_21340)	-	4713342..4713908 (-)	567	WP_413428445.1	PilN domain-containing protein	-
ACEN8Q_RS21355 (ACEN8Q_21345)	comM	4713908..4714972 (-)	1065	WP_413703709.1	pilus assembly protein PilM	Machinery gene
ACEN8Q_RS21360 (ACEN8Q_21350)	-	4715189..4717627 (+)	2439	WP_413705515.1	penicillin-binding protein 1A	-
ACEN8Q_RS21365 (ACEN8Q_21355)	-	4717801..4719069 (-)	1269	WP_008017023.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37892.55 Da
• Isoelectric Point: 4.6860

>NTDB_id=1044458 ACEN8Q_RS21355 WP_413703709.1 4713908..4714972(-) (comM) [Pseudomonas sp. Pseusp16 strain CT11-16]
MPGLFNKKSSTLLGIDISSTSVKLLELSRQGERYRVEAYAVEPLPVGAVIEKNIAELEGVGLALTRALAKARTGLKNVAV
AVAGSAVITKIIEMDAGLCEDEMESQLKIEADQYIPYPLDEVAIDFEVLGASVRNPERVNVLLAACRKENVEVREAALTL
AGLTARVVDVEAYALERSFGLLASRLAVSGERLTVAVVDIGATMTTLSVLQNGRIIYTREQLFGGRQLTEEIQRRYGLAL
EQAGLAQKKGGLPDDYAGEVLQPFREALVQQVSRSLQFFFASGQYSSVDHILLAGGTASVPGLDRLVEQQLGTPTQVANP
FSEMILGNKVNGAALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1044458 ACEN8Q_RS21355 WP_413703709.1 4713908..4714972(-) (comM) [Pseudomonas sp. Pseusp16 strain CT11-16]
GTGCCAGGACTCTTCAACAAAAAATCCAGTACGCTGCTGGGAATCGATATCAGCTCCACCTCGGTGAAGCTTCTGGAGTT
GAGCCGTCAGGGCGAGCGCTACCGGGTCGAAGCCTATGCGGTCGAGCCCTTGCCGGTTGGCGCTGTGATCGAGAAAAACA
TCGCTGAGCTCGAAGGCGTGGGGCTGGCCCTCACTCGCGCGCTGGCCAAGGCCAGAACCGGCCTCAAGAACGTGGCCGTG
GCCGTGGCAGGCTCGGCAGTGATCACCAAGATCATCGAGATGGATGCCGGGCTTTGCGAAGACGAGATGGAAAGCCAGCT
GAAGATCGAGGCCGATCAGTACATTCCTTACCCCCTGGATGAAGTCGCGATCGACTTTGAAGTCTTGGGCGCCTCCGTGC
GCAATCCGGAGCGCGTCAACGTGCTGCTCGCCGCTTGCCGCAAGGAAAACGTCGAAGTCCGCGAGGCGGCCCTGACGCTG
GCGGGGCTGACCGCCCGCGTGGTCGATGTCGAGGCCTACGCGCTGGAGCGCTCATTCGGCTTGCTGGCCAGTCGGCTCGC
GGTCTCCGGGGAGCGTTTGACTGTCGCAGTGGTGGATATCGGCGCCACCATGACCACCCTGAGCGTGCTGCAGAACGGGC
GGATTATCTACACCCGTGAACAGCTGTTCGGCGGTCGGCAGTTGACCGAGGAAATCCAGCGTCGTTATGGCCTGGCGCTG
GAGCAGGCGGGTCTGGCGCAAAAGAAGGGCGGCTTGCCGGATGACTATGCCGGTGAGGTCTTGCAGCCATTCCGAGAGGC
GCTGGTGCAGCAGGTATCGCGCTCGTTGCAGTTCTTCTTTGCCTCCGGCCAGTACAGCAGCGTCGACCATATCCTGCTGG
CCGGCGGTACCGCGTCGGTCCCGGGGCTGGACCGTTTGGTCGAGCAGCAATTGGGCACGCCGACCCAGGTCGCGAATCCT
TTTTCCGAAATGATTCTGGGCAACAAGGTCAATGGTGCTGCCCTGGCGAGTGATGCCCCGGCGTTGATGATCGCCTGTGG
TCTTGCCCTCAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.84	99.153	0.554
pilM	Acinetobacter baumannii D1279779	55.556	99.153	0.551
comM	Acinetobacter baylyi ADP1	53.955	100	0.54
pilM	Legionella pneumophila strain ERS1305867	47.74	100	0.477