Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACEPOU_RS02490 | Genome accession | NZ_CP168498 |
| Coordinates | 473600..474070 (+) | Length | 156 a.a. |
| NCBI ID | WP_000610650.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain J22 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 468600..479070
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPOU_RS02455 (ACEPOU_02455) | - | 468924..469244 (+) | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| ACEPOU_RS02460 (ACEPOU_02460) | - | 469241..469402 (+) | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| ACEPOU_RS02465 (ACEPOU_02465) | - | 469495..469755 (+) | 261 | WP_000291488.1 | DUF1108 family protein | - |
| ACEPOU_RS02470 (ACEPOU_02470) | - | 469764..470027 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACEPOU_RS02475 (ACEPOU_02475) | - | 470036..471979 (+) | 1944 | WP_000700560.1 | AAA family ATPase | - |
| ACEPOU_RS02480 (ACEPOU_02480) | - | 471981..472901 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| ACEPOU_RS02485 (ACEPOU_02485) | - | 472982..473599 (+) | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| ACEPOU_RS02490 (ACEPOU_02490) | ssbA | 473600..474070 (+) | 471 | WP_000610650.1 | single-stranded DNA-binding protein | Machinery gene |
| ACEPOU_RS02495 (ACEPOU_02495) | - | 474100..474993 (+) | 894 | WP_000148326.1 | DnaD domain-containing protein | - |
| ACEPOU_RS02500 (ACEPOU_02500) | - | 475000..475218 (+) | 219 | WP_088563324.1 | hypothetical protein | - |
| ACEPOU_RS02505 (ACEPOU_02505) | - | 475227..475631 (+) | 405 | WP_000401976.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACEPOU_RS02510 (ACEPOU_02510) | - | 475644..476015 (+) | 372 | WP_000101268.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACEPOU_RS02515 (ACEPOU_02515) | - | 476016..476264 (+) | 249 | WP_001126836.1 | phi PVL orf 51-like protein | - |
| ACEPOU_RS02520 (ACEPOU_02520) | - | 476329..476778 (+) | 450 | WP_000982708.1 | YopX family protein | - |
| ACEPOU_RS02525 (ACEPOU_02525) | - | 476832..477059 (+) | 228 | Protein_490 | hypothetical protein | - |
| ACEPOU_RS02530 (ACEPOU_02530) | - | 477052..477306 (+) | 255 | WP_000370292.1 | DUF1024 family protein | - |
| ACEPOU_RS02535 (ACEPOU_02535) | - | 477426..477626 (+) | 201 | WP_000265042.1 | DUF1514 family protein | - |
| ACEPOU_RS02540 (ACEPOU_02540) | - | 477654..478070 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACEPOU_RS02545 (ACEPOU_02545) | - | 478302..478601 (+) | 300 | WP_000988332.1 | HNH endonuclease | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17658.50 Da Isoelectric Point: 4.9628
>NTDB_id=1044328 ACEPOU_RS02490 WP_000610650.1 473600..474070(+) (ssbA) [Staphylococcus aureus strain J22]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1044328 ACEPOU_RS02490 WP_000610650.1 473600..474070(+) (ssbA) [Staphylococcus aureus strain J22]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAATCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATAAATGTCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACGATGATTTACCATTCTAA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAATCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATAAATGTCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.765 |
100 |
0.564 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Vibrio cholerae strain A1552 |
31.492 |
100 |
0.365 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |