Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   ACEN3H_RS17510 Genome accession   NZ_CP168231
Coordinates   3749255..3750388 (+) Length   377 a.a.
NCBI ID   WP_373358193.1    Uniprot ID   -
Organism   Acinetobacter lactucae strain 2024CK-01095     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3744255..3755388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN3H_RS17485 (ACEN3H_17485) - 3744511..3744717 (-) 207 WP_031947118.1 hypothetical protein -
  ACEN3H_RS17490 (ACEN3H_17490) - 3744771..3746885 (-) 2115 WP_373358191.1 TonB-dependent copper receptor -
  ACEN3H_RS17495 (ACEN3H_17495) - 3746958..3747383 (-) 426 WP_373358192.1 DUF2946 family protein -
  ACEN3H_RS17500 (ACEN3H_17500) def 3747427..3747957 (-) 531 WP_016144059.1 peptide deformylase -
  ACEN3H_RS17505 (ACEN3H_17505) tsaP 3748080..3749234 (+) 1155 WP_062848996.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACEN3H_RS17510 (ACEN3H_17510) dprA 3749255..3750388 (+) 1134 WP_373358193.1 DNA-processing protein DprA Machinery gene
  ACEN3H_RS17515 (ACEN3H_17515) - 3750440..3751009 (+) 570 WP_373358194.1 L-threonylcarbamoyladenylate synthase -
  ACEN3H_RS17520 (ACEN3H_17520) - 3751401..3752321 (-) 921 WP_079748210.1 DMT family transporter -
  ACEN3H_RS17525 (ACEN3H_17525) - 3752426..3753079 (-) 654 WP_081176087.1 TetR/AcrR family transcriptional regulator -
  ACEN3H_RS17530 (ACEN3H_17530) - 3753215..3754429 (+) 1215 WP_057104995.1 MFS transporter -
  ACEN3H_RS17535 (ACEN3H_17535) - 3754451..3755215 (+) 765 WP_373358195.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41863.47 Da        Isoelectric Point: 6.5416

>NTDB_id=1043340 ACEN3H_RS17510 WP_373358193.1 3749255..3750388(+) (dprA) [Acinetobacter lactucae strain 2024CK-01095]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIVDYFGNCEKAVQPVNLAQWSNLGLHANHLKRVAEFQTAQGQAQFEKLIQQI
HQHTDFILTADDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASVHQRTIAVTGTGLDSTYPAQNKKLAEQILAQNGAIITEFLPGTLPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNSTEEAIVSSTSEI
PEHLVNLYQSLDWVGQDIDQLVLYHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=1043340 ACEN3H_RS17510 WP_373358193.1 3749255..3750388(+) (dprA) [Acinetobacter lactucae strain 2024CK-01095]
ATGCTTACTCAACTTTCTTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCTTTAGTCAGCTTTAA
AAAAATTGTCGATTATTTTGGTAACTGCGAAAAAGCAGTCCAACCAGTTAATTTGGCACAGTGGTCAAATCTTGGTTTAC
ATGCTAATCATTTAAAACGTGTAGCTGAATTCCAAACTGCTCAAGGTCAAGCTCAGTTTGAAAAACTGATTCAACAGATC
CATCAGCATACTGACTTTATTTTAACGGCAGATGACTCAGGCTATCCCACTCAATTATTACCTTATACTGATCACCCCCC
TATCATTTTTGGAAAAGGTCAGGCACAAGCCTTATTACAACCACAAATTGCGATTGTGGGTAGTCGAAAACCAAGCCCGC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTACTACTTAAGTGAAAAAGGATTTTATGTAAGTAGTGGCTTGGCATATGGT
ATTGATGAAGCTGCTCATCAAGGTGCTTCAGTACATCAACGCACAATTGCTGTCACAGGAACTGGTCTAGACAGTACCTA
TCCTGCTCAAAATAAAAAACTTGCCGAACAAATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCTGGGACCC
TACCCTTACAGCAGCATTTTCCACGTCGAAACCGAATTGTCAGCGGTCTGAGTTTAGGAGTACTCGTCGTAGAAGCGACG
TTAAAAAGTGGCTCTCTCATCACTGCGAATAAAGCTGCCGAACAAGGTAAAACTGTATTTGCCATCCCTGGTCATATTTA
CAGTGAGTTTCATCAAGGTTGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTTGCTTTACCAACTCAGTGGCAAAGTCAGCAACAAAACTCCACCGAGGAAGCAATAGTTTCTAGTACCTCAGAAATT
CCTGAGCATTTAGTTAATCTTTATCAGTCTTTAGATTGGGTTGGACAAGATATTGACCAGCTTGTTTTGTATCACTCTCA
ACCTGTGGCAGAACTCACCTCTTCACTGATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGTTGTATTTAC
GTTGTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

90.716

100

0.907

  dprA Acinetobacter baumannii strain A118

90.186

100

0.902

  dprA Acinetobacter baylyi ADP1

70.604

100

0.714

  dprA Vibrio cholerae strain A1552

43.544

88.329

0.385

  dprA Vibrio campbellii strain DS40M4

40.936

90.716

0.371


Multiple sequence alignment