Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   ACEN3H_RS17505 Genome accession   NZ_CP168231
Coordinates   3748080..3749234 (+) Length   384 a.a.
NCBI ID   WP_062848996.1    Uniprot ID   -
Organism   Acinetobacter lactucae strain 2024CK-01095     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3743080..3754234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN3H_RS17480 (ACEN3H_17480) - 3743229..3744443 (+) 1215 WP_373358190.1 oxygenase MpaB family protein -
  ACEN3H_RS17485 (ACEN3H_17485) - 3744511..3744717 (-) 207 WP_031947118.1 hypothetical protein -
  ACEN3H_RS17490 (ACEN3H_17490) - 3744771..3746885 (-) 2115 WP_373358191.1 TonB-dependent copper receptor -
  ACEN3H_RS17495 (ACEN3H_17495) - 3746958..3747383 (-) 426 WP_373358192.1 DUF2946 family protein -
  ACEN3H_RS17500 (ACEN3H_17500) def 3747427..3747957 (-) 531 WP_016144059.1 peptide deformylase -
  ACEN3H_RS17505 (ACEN3H_17505) tsaP 3748080..3749234 (+) 1155 WP_062848996.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACEN3H_RS17510 (ACEN3H_17510) dprA 3749255..3750388 (+) 1134 WP_373358193.1 DNA-processing protein DprA Machinery gene
  ACEN3H_RS17515 (ACEN3H_17515) - 3750440..3751009 (+) 570 WP_373358194.1 L-threonylcarbamoyladenylate synthase -
  ACEN3H_RS17520 (ACEN3H_17520) - 3751401..3752321 (-) 921 WP_079748210.1 DMT family transporter -
  ACEN3H_RS17525 (ACEN3H_17525) - 3752426..3753079 (-) 654 WP_081176087.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42546.40 Da        Isoelectric Point: 7.2978

>NTDB_id=1043339 ACEN3H_RS17505 WP_062848996.1 3748080..3749234(+) (tsaP) [Acinetobacter lactucae strain 2024CK-01095]
MKKVFDGMVQFHALGIKKHLLAFALFTGVAFGTVAEGYAASPNHNPPSLKSNAPHVYVVKRGDTLWDISGHFLSKPWRWP
EIWANNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQMTNLQPQVRVESLNNNVPVIPLEHIKQWLE
HSTILPADAIEHTPYVVGTADQRVLAAKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELQQVASGIAIS
SEKDITTLELTDSYNSEVRRGDRVMPEEEATLPTLFYPVDATQVPEGGKIIRVMGSIGTAGKDSVVTLDRGTVQGVQVGQ
VFDITQQGETIRDPKTKESIKLPGQQIGSLMVFRTFDQLSYAYVLESDLPVKVGSSIQPPRFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=1043339 ACEN3H_RS17505 WP_062848996.1 3748080..3749234(+) (tsaP) [Acinetobacter lactucae strain 2024CK-01095]
ATGAAAAAGGTTTTTGACGGCATGGTTCAATTTCATGCTTTGGGGATAAAAAAGCATTTACTTGCTTTCGCACTTTTTAC
AGGGGTTGCTTTTGGTACAGTAGCAGAGGGTTATGCTGCTAGTCCGAACCATAATCCACCCTCTCTTAAAAGTAATGCAC
CACATGTCTACGTAGTAAAACGAGGAGATACACTCTGGGATATTTCCGGTCACTTTCTCAGTAAACCTTGGCGCTGGCCT
GAAATCTGGGCAAATAATCAACATGTCAAAAATCCGCACTGGATTTATCCGGGTGATCGGTTACTGCTATGTAGTTTAGA
TGGCCGTCCATTGGTTGGAAAAGATGAGGGAGATGGTTGTGTCGGCATTATTCGCCGTTACACAGGTCAAATGACAAATT
TACAACCTCAAGTACGTGTGGAGTCACTAAACAATAACGTACCTGTTATTCCTCTTGAGCATATTAAACAGTGGTTAGAA
CACAGCACTATTCTACCAGCCGATGCAATTGAACATACTCCTTATGTAGTTGGTACTGCCGATCAACGTGTACTCGCGGC
AAAAGGTCAAACTATTTATGCACGCGGACAAGGTTTAATTAATGGTCAACGTTATGCAGTCTACCGTGAAGGTGAACCTT
ATTATTTCACCGATAATAAAGGCAAAAAGCACAGTCTAGGTATTGAGCTACAACAAGTTGCCTCAGGCATCGCCATCTCT
TCTGAAAAAGACATTACCACGCTTGAGTTAACTGACAGCTACAATTCTGAAGTACGTCGTGGTGATCGGGTGATGCCAGA
AGAAGAGGCTACATTGCCTACTTTATTTTATCCGGTGGACGCTACTCAAGTTCCAGAGGGTGGCAAAATCATTCGTGTAA
TGGGATCAATTGGTACTGCTGGCAAAGATAGTGTAGTGACTTTGGACAGAGGTACTGTACAAGGTGTTCAAGTAGGTCAA
GTTTTTGATATTACGCAGCAAGGTGAAACCATTCGAGATCCTAAAACAAAAGAATCAATAAAGTTACCTGGACAACAAAT
TGGTAGCTTAATGGTTTTTAGAACTTTTGATCAGTTGAGTTATGCCTACGTATTAGAAAGCGATTTACCAGTTAAAGTTG
GTTCAAGCATTCAGCCACCCCGCTTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

89.323

100

0.893


Multiple sequence alignment