Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | QOR56_RS01160 | Genome accession | NZ_OX460906 |
| Coordinates | 199295..200338 (+) | Length | 347 a.a. |
| NCBI ID | WP_223297804.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae isolate MRI Z2-265 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 194295..205338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QOR56_RS01145 | - | 196329..196694 (+) | 366 | WP_000285374.1 | DUF1033 family protein | - |
| QOR56_RS01150 | - | 196924..198384 (+) | 1461 | WP_000468685.1 | IS1182-like element IS1563 family transposase | - |
| QOR56_RS01155 | comGA | 198430..199401 (+) | 972 | WP_000250798.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QOR56_RS01160 | comGB | 199295..200338 (+) | 1044 | WP_223297804.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| QOR56_RS01165 | comGF | 200335..200790 (+) | 456 | WP_000793378.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| QOR56_RS01170 | comGG | 200768..201139 (+) | 372 | WP_000601101.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| QOR56_RS01175 | comGH | 201254..202228 (+) | 975 | WP_001008569.1 | class I SAM-dependent methyltransferase | Machinery gene |
| QOR56_RS01180 | - | 202260..203453 (+) | 1194 | WP_000047534.1 | acetate kinase | - |
| QOR56_RS01185 | - | 203581..203773 (+) | 193 | Protein_180 | helix-turn-helix transcriptional regulator | - |
| QOR56_RS01190 | - | 203752..204018 (+) | 267 | Protein_181 | hypothetical protein | - |
| QOR56_RS01195 | - | 204114..205289 (+) | 1176 | WP_000191687.1 | IS256-like element ISSag11 family transposase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 40014.77 Da Isoelectric Point: 9.9642
>NTDB_id=1042889 QOR56_RS01160 WP_223297804.1 199295..200338(+) (comGB) [Streptococcus agalactiae isolate MRI Z2-265]
MDKWISWLKKDISVRNRHKSKKLSLKKQRKVVQLFNNLFASGFSLTDMVTFLKRSKLLSDCYTDRMNKALLEGKDLSKML
GELGFSDTVITQVALADLHGNISRSLLKIESYLANLLLVRKKVIEVATYPLILLSFLVLIMIGLRHYLMPQLGENNFATR
LITNVPNIFLLLLAVVLIFSLIFYIIQKRLSRIKVACFLTTIPLVGSYVKLYLTAYYAREWGNLLSQGVELDQIVKVMQN
QKSKLFREIGYDMEEGFLSGKAFHQKVLDYPFFLTELSLMIEYGQVKAKLGTELDIYADEKWEDFFTKLARATQLIQPVI
FIFVALIIVMIYAAMLLPMYQNMEILS
MDKWISWLKKDISVRNRHKSKKLSLKKQRKVVQLFNNLFASGFSLTDMVTFLKRSKLLSDCYTDRMNKALLEGKDLSKML
GELGFSDTVITQVALADLHGNISRSLLKIESYLANLLLVRKKVIEVATYPLILLSFLVLIMIGLRHYLMPQLGENNFATR
LITNVPNIFLLLLAVVLIFSLIFYIIQKRLSRIKVACFLTTIPLVGSYVKLYLTAYYAREWGNLLSQGVELDQIVKVMQN
QKSKLFREIGYDMEEGFLSGKAFHQKVLDYPFFLTELSLMIEYGQVKAKLGTELDIYADEKWEDFFTKLARATQLIQPVI
FIFVALIIVMIYAAMLLPMYQNMEILS
Nucleotide
Download Length: 1044 bp
>NTDB_id=1042889 QOR56_RS01160 WP_223297804.1 199295..200338(+) (comGB) [Streptococcus agalactiae isolate MRI Z2-265]
ATAGACAAGTGGATATCTTGGCTGAAGAAGGACATATCAGTAAGAAACAGGCACAAGTCGAAAAAATTATCCCTCAAGAA
ACAACGGAAAGTAGTCCAACTTTTTAATAATCTTTTTGCTAGTGGTTTTTCTTTAACTGATATGGTCACCTTCTTAAAGA
GGAGTAAGTTATTGTCTGATTGTTATACAGATAGGATGAATAAGGCATTATTAGAGGGAAAAGATTTATCAAAAATGTTA
GGAGAGTTAGGTTTTTCTGACACTGTTATCACACAGGTTGCATTAGCTGATTTGCATGGTAACATTTCAAGGAGCCTACT
AAAGATTGAGTCTTATTTAGCTAATCTTTTGTTAGTTAGAAAAAAAGTAATAGAAGTAGCTACTTACCCATTGATATTAT
TGTCTTTTCTGGTGCTAATTATGATTGGCCTTAGGCATTATTTAATGCCCCAATTAGGAGAAAATAATTTTGCAACTAGA
CTGATTACAAATGTGCCGAATATTTTCTTATTACTTTTAGCAGTTGTACTTATTTTTAGTTTAATATTTTATATTATTCA
AAAGCGATTGTCGCGCATTAAAGTAGCTTGTTTTTTAACAACAATTCCCTTAGTTGGATCATATGTTAAGCTTTATTTAA
CTGCTTACTATGCCCGTGAGTGGGGAAATTTATTAAGTCAAGGTGTTGAATTGGACCAAATTGTTAAAGTAATGCAAAAT
CAGAAATCCAAACTTTTTAGGGAAATAGGATATGACATGGAAGAAGGTTTTCTATCAGGTAAAGCATTTCACCAAAAAGT
ATTAGACTATCCGTTTTTCTTAACTGAGCTTAGTTTAATGATTGAATATGGTCAAGTTAAGGCGAAATTAGGAACAGAGT
TAGATATATATGCTGATGAGAAGTGGGAGGATTTTTTTACAAAATTAGCTAGAGCGACCCAGTTAATCCAACCTGTTATT
TTTATTTTTGTAGCTCTTATCATTGTTATGATTTATGCAGCAATGCTGTTACCAATGTATCAAAATATGGAGATATTATC
ATGA
ATAGACAAGTGGATATCTTGGCTGAAGAAGGACATATCAGTAAGAAACAGGCACAAGTCGAAAAAATTATCCCTCAAGAA
ACAACGGAAAGTAGTCCAACTTTTTAATAATCTTTTTGCTAGTGGTTTTTCTTTAACTGATATGGTCACCTTCTTAAAGA
GGAGTAAGTTATTGTCTGATTGTTATACAGATAGGATGAATAAGGCATTATTAGAGGGAAAAGATTTATCAAAAATGTTA
GGAGAGTTAGGTTTTTCTGACACTGTTATCACACAGGTTGCATTAGCTGATTTGCATGGTAACATTTCAAGGAGCCTACT
AAAGATTGAGTCTTATTTAGCTAATCTTTTGTTAGTTAGAAAAAAAGTAATAGAAGTAGCTACTTACCCATTGATATTAT
TGTCTTTTCTGGTGCTAATTATGATTGGCCTTAGGCATTATTTAATGCCCCAATTAGGAGAAAATAATTTTGCAACTAGA
CTGATTACAAATGTGCCGAATATTTTCTTATTACTTTTAGCAGTTGTACTTATTTTTAGTTTAATATTTTATATTATTCA
AAAGCGATTGTCGCGCATTAAAGTAGCTTGTTTTTTAACAACAATTCCCTTAGTTGGATCATATGTTAAGCTTTATTTAA
CTGCTTACTATGCCCGTGAGTGGGGAAATTTATTAAGTCAAGGTGTTGAATTGGACCAAATTGTTAAAGTAATGCAAAAT
CAGAAATCCAAACTTTTTAGGGAAATAGGATATGACATGGAAGAAGGTTTTCTATCAGGTAAAGCATTTCACCAAAAAGT
ATTAGACTATCCGTTTTTCTTAACTGAGCTTAGTTTAATGATTGAATATGGTCAAGTTAAGGCGAAATTAGGAACAGAGT
TAGATATATATGCTGATGAGAAGTGGGAGGATTTTTTTACAAAATTAGCTAGAGCGACCCAGTTAATCCAACCTGTTATT
TTTATTTTTGTAGCTCTTATCATTGTTATGATTTATGCAGCAATGCTGTTACCAATGTATCAAAATATGGAGATATTATC
ATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Streptococcus mutans UA140 |
62.17 |
98.271 |
0.611 |
| comGB | Streptococcus mutans UA159 |
61.877 |
98.271 |
0.608 |
| comGB | Streptococcus gordonii str. Challis substr. CH1 |
56.012 |
98.271 |
0.55 |
| comGB/cglB | Streptococcus mitis NCTC 12261 |
54.925 |
96.542 |
0.53 |
| comGB/cglB | Streptococcus mitis SK321 |
54.328 |
96.542 |
0.524 |
| comGB/cglB | Streptococcus pneumoniae Rx1 |
53.433 |
96.542 |
0.516 |
| comGB/cglB | Streptococcus pneumoniae D39 |
53.433 |
96.542 |
0.516 |
| comGB/cglB | Streptococcus pneumoniae R6 |
53.433 |
96.542 |
0.516 |
| comGB/cglB | Streptococcus pneumoniae TIGR4 |
53.433 |
96.542 |
0.516 |
| comGB | Lactococcus lactis subsp. cremoris KW2 |
50.148 |
97.118 |
0.487 |