Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACCK22_RS06250 | Genome accession | NZ_CP168085 |
| Coordinates | 1228588..1229058 (+) | Length | 156 a.a. |
| NCBI ID | WP_064137532.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain CUBIST-27 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1223588..1234058
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCK22_RS06205 (ACCK22_06205) | - | 1223668..1223844 (+) | 177 | WP_001094935.1 | hypothetical protein | - |
| ACCK22_RS06210 (ACCK22_06210) | - | 1223819..1224049 (-) | 231 | WP_000395457.1 | hypothetical protein | - |
| ACCK22_RS06215 (ACCK22_06215) | - | 1224099..1224245 (+) | 147 | WP_000230553.1 | hypothetical protein | - |
| ACCK22_RS06220 (ACCK22_06220) | - | 1224229..1224390 (+) | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| ACCK22_RS06225 (ACCK22_06225) | - | 1224483..1224743 (+) | 261 | WP_000291488.1 | DUF1108 family protein | - |
| ACCK22_RS06230 (ACCK22_06230) | - | 1224752..1225015 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACCK22_RS06235 (ACCK22_06235) | - | 1225024..1226967 (+) | 1944 | WP_031783568.1 | AAA family ATPase | - |
| ACCK22_RS06240 (ACCK22_06240) | - | 1226969..1227889 (+) | 921 | WP_000138472.1 | recombinase RecT | - |
| ACCK22_RS06245 (ACCK22_06245) | - | 1227970..1228587 (+) | 618 | WP_372496635.1 | MBL fold metallo-hydrolase | - |
| ACCK22_RS06250 (ACCK22_06250) | ssbA | 1228588..1229058 (+) | 471 | WP_064137532.1 | single-stranded DNA-binding protein | Machinery gene |
| ACCK22_RS06255 (ACCK22_06255) | - | 1229088..1229972 (+) | 885 | WP_064137534.1 | DnaD domain protein | - |
| ACCK22_RS06260 (ACCK22_06260) | - | 1229979..1230197 (+) | 219 | WP_001662399.1 | hypothetical protein | - |
| ACCK22_RS06265 (ACCK22_06265) | - | 1230206..1230610 (+) | 405 | WP_001662398.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACCK22_RS06270 (ACCK22_06270) | - | 1230623..1230994 (+) | 372 | WP_000101268.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACCK22_RS06275 (ACCK22_06275) | - | 1230995..1231243 (+) | 249 | WP_001622146.1 | phi PVL orf 51-like protein | - |
| ACCK22_RS06280 (ACCK22_06280) | - | 1231258..1231650 (+) | 393 | WP_001062709.1 | hypothetical protein | - |
| ACCK22_RS06285 (ACCK22_06285) | - | 1231647..1231838 (+) | 192 | WP_000983947.1 | hypothetical protein | - |
| ACCK22_RS06290 (ACCK22_06290) | - | 1231838..1232269 (+) | 432 | WP_001622147.1 | hypothetical protein | - |
| ACCK22_RS06295 (ACCK22_06295) | - | 1232262..1232510 (+) | 249 | WP_000370293.1 | DUF1024 family protein | - |
| ACCK22_RS06300 (ACCK22_06300) | - | 1232503..1232673 (+) | 171 | WP_001622148.1 | hypothetical protein | - |
| ACCK22_RS06305 (ACCK22_06305) | - | 1232666..1233193 (+) | 528 | WP_000181816.1 | dUTP diphosphatase | - |
| ACCK22_RS06310 (ACCK22_06310) | - | 1233230..1233466 (+) | 237 | WP_000195831.1 | DUF1381 domain-containing protein | - |
| ACCK22_RS06315 (ACCK22_06315) | - | 1233491..1233727 (+) | 237 | WP_000483477.1 | hypothetical protein | - |
| ACCK22_RS06320 (ACCK22_06320) | rinB | 1233720..1233893 (+) | 174 | WP_000595257.1 | transcriptional activator RinB | - |
| ACCK22_RS06325 (ACCK22_06325) | - | 1233894..1234040 (+) | 147 | WP_000989998.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17613.47 Da Isoelectric Point: 5.2672
>NTDB_id=1041957 ACCK22_RS06250 WP_064137532.1 1228588..1229058(+) (ssbA) [Staphylococcus aureus strain CUBIST-27]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1041957 ACCK22_RS06250 WP_064137532.1 1228588..1229058(+) (ssbA) [Staphylococcus aureus strain CUBIST-27]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATAAATGTCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAGAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTGA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATAAATGTCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAGAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.765 |
100 |
0.564 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Vibrio cholerae strain A1552 |
32.044 |
100 |
0.372 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |