Detailed information NTG1040995

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABRP31_RS25035
• Genome accession: NZ_CP167995
• Coordinates: 5557029..5558093 (-)
• Length: 354 a.a.
• NCBI ID: WP_087271122.1
• Uniprot ID: A0A1Y3NX98
• Organism: Pseudomonas caspiana strain WHRI 7043
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5552029..5563093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABRP31_RS25010 (ABRP31_025010)	aroK	5552637..5553155 (-)	519	WP_087271137.1	shikimate kinase AroK	-
ABRP31_RS25015 (ABRP31_025015)	pilQ	5553160..5555262 (-)	2103	WP_349972186.1	type IV pilus secretin PilQ	Machinery gene
ABRP31_RS25020 (ABRP31_025020)	pilP	5555319..5555846 (-)	528	WP_087271131.1	type 4a pilus biogenesis lipoprotein PilP	-
ABRP31_RS25025 (ABRP31_025025)	pilO	5555843..5556466 (-)	624	WP_349972185.1	type 4a pilus biogenesis protein PilO	-
ABRP31_RS25030 (ABRP31_025030)	-	5556463..5557029 (-)	567	WP_349972184.1	PilN domain-containing protein	-
ABRP31_RS25035 (ABRP31_025035)	pilM	5557029..5558093 (-)	1065	WP_087271122.1	pilus assembly protein PilM	Machinery gene
ABRP31_RS25040 (ABRP31_025040)	-	5558305..5560761 (+)	2457	WP_372489476.1	penicillin-binding protein 1A	-
ABRP31_RS25045 (ABRP31_025045)	-	5560936..5562204 (-)	1269	WP_027901987.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37947.40 Da
• Isoelectric Point: 4.5599

>NTDB_id=1040995 ABRP31_RS25035 WP_087271122.1 5557029..5558093(-) (pilM) [Pseudomonas caspiana strain WHRI 7043]
MFELFSKKANTLLGIDISSTSVKLLELSRSGTRYKVESYAVEPLPANAVIEKNIAELEGVGNALTRVLVKARTSVKSVAV
AVAGSAVITKTIEMDAGLSDDDMENQLKIEADQYIPYPLEEVAIDFEVQGYSLRNPERVEVLLAACRKENVEVREAALAL
AGLSARVVDVEAYALERAFGLLSAQLGNGHDQLTVAIVDIGATMTTLSVLHNGRIIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYLSEVLQPFKDAVVQQVSRSLQFFFAAGQYSAVDYIMLAGGTASVSGLDNLVQQRIGTPTLVANP
FADMALGAKVNAGALATDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1040995 ABRP31_RS25035 WP_087271122.1 5557029..5558093(-) (pilM) [Pseudomonas caspiana strain WHRI 7043]
GTGTTCGAACTCTTCAGTAAGAAGGCCAACACCCTTCTAGGGATCGATATTAGCTCTACATCGGTGAAACTCCTTGAATT
GAGTCGTTCCGGCACGCGCTACAAGGTCGAGTCTTACGCGGTTGAGCCACTTCCCGCGAACGCTGTGATTGAGAAGAACA
TTGCCGAGCTTGAAGGGGTCGGCAATGCGCTGACGCGTGTCTTGGTCAAGGCTCGCACAAGCGTCAAATCTGTGGCGGTT
GCCGTGGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGACGCTGGCCTGTCGGATGATGACATGGAGAACCAGCT
GAAGATCGAGGCCGATCAATACATTCCTTATCCGCTGGAAGAGGTCGCCATCGATTTCGAGGTCCAGGGATATTCGCTGC
GCAACCCTGAGCGTGTTGAGGTCTTGCTTGCTGCCTGCCGCAAAGAAAACGTCGAGGTGCGCGAAGCAGCTTTGGCGCTG
GCGGGGCTTAGTGCACGGGTTGTTGACGTGGAGGCTTATGCCCTGGAGCGCGCATTCGGATTGCTGTCGGCACAGTTGGG
TAATGGTCATGACCAACTGACCGTTGCAATTGTCGATATCGGCGCAACCATGACGACCCTCAGCGTGCTGCACAACGGCC
GCATCATCTATACCCGCGAACAGCTGTTCGGCGGGCGTCAGCTCACCGAAGAAATCCAGCGCCGCTATGGCCTCTCTGTG
GAAGAGGCCGGTCTGGCGAAGAAGCAGGGCGGTCTGCCGGATGATTATTTATCCGAAGTGTTGCAGCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGATCCTTGCAGTTTTTTTTCGCGGCAGGGCAATACAGTGCGGTGGACTACATCATGCTGG
CCGGTGGTACCGCATCCGTTTCCGGGCTGGATAATCTGGTTCAGCAGCGTATCGGCACGCCGACGCTGGTCGCCAACCCG
TTTGCGGACATGGCTCTTGGCGCCAAGGTCAATGCCGGTGCGTTGGCCACTGATGCTCCAGCGTTGATGATCGCATGCGG
TCTGGCCCTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A1Y3NX98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	52.825	100	0.528
pilM	Legionella pneumophila strain ERS1305867	46.479	100	0.466