Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | QUF32_RS01650 | Genome accession | NZ_AP028128 |
| Coordinates | 353081..353611 (+) | Length | 176 a.a. |
| NCBI ID | WP_020332215.1 | Uniprot ID | S7JBV3 |
| Organism | Vibrio fluvialis strain IDH05335 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 348081..358611
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUF32_RS01635 (KKIDH5335_02830) | uvrA | 348191..351013 (-) | 2823 | WP_044364108.1 | excinuclease ABC subunit UvrA | - |
| QUF32_RS01640 (KKIDH5335_02840) | galU | 351151..352020 (-) | 870 | WP_020433248.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| QUF32_RS01645 (KKIDH5335_02850) | qstR | 352148..352798 (-) | 651 | WP_024374534.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| QUF32_RS01650 (KKIDH5335_02860) | ssb | 353081..353611 (+) | 531 | WP_020332215.1 | single-stranded DNA-binding protein | Machinery gene |
| QUF32_RS01655 (KKIDH5335_02870) | csrD | 353747..355741 (+) | 1995 | WP_202641329.1 | RNase E specificity factor CsrD | - |
| QUF32_RS01660 (KKIDH5335_02880) | - | 355749..357197 (+) | 1449 | WP_286236013.1 | MSHA biogenesis protein MshI | - |
| QUF32_RS01665 (KKIDH5335_02890) | - | 357194..357844 (+) | 651 | WP_222752364.1 | MSHA biogenesis protein MshJ | - |
| QUF32_RS01670 (KKIDH5335_02900) | - | 357870..358148 (+) | 279 | WP_172560579.1 | MSHA biogenesis protein MshK | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 19526.69 Da Isoelectric Point: 5.7626
>NTDB_id=103928 QUF32_RS01650 WP_020332215.1 353081..353611(+) (ssb) [Vibrio fluvialis strain IDH05335]
MATRGVNKVILVGNLGSDPEVRYMPSGGAVANITVATSESWRDKATGEQREKTEWHRVALYGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEIVVQGYNGTMQMLGGRQQGGMPAQGGGMNQPQQGGWGQPQQPAMQQHKPMQQQAPQQSQ
PQYNEPPMDFDDDIPF
MATRGVNKVILVGNLGSDPEVRYMPSGGAVANITVATSESWRDKATGEQREKTEWHRVALYGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEIVVQGYNGTMQMLGGRQQGGMPAQGGGMNQPQQGGWGQPQQPAMQQHKPMQQQAPQQSQ
PQYNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=103928 QUF32_RS01650 WP_020332215.1 353081..353611(+) (ssb) [Vibrio fluvialis strain IDH05335]
ATGGCAACCCGTGGCGTGAATAAAGTAATTTTGGTTGGCAACTTGGGTAGTGATCCGGAAGTTCGCTATATGCCAAGCGG
TGGCGCAGTTGCGAACATCACTGTAGCCACGTCAGAATCATGGCGTGATAAAGCAACCGGCGAACAGCGTGAGAAAACAG
AATGGCACCGTGTCGCTCTGTATGGAAAACTCGCAGAAGTCGCAGGTGAGTATCTGCGCAAAGGTTCTCAGGTTTACATC
GAAGGCCAGCTGCAAACACGTAAGTGGCAAGATCAAAGCGGTCAGGACCGCTACTCAACCGAAATCGTTGTACAGGGCTA
CAATGGCACTATGCAGATGCTCGGTGGCCGTCAGCAAGGTGGTATGCCTGCTCAGGGTGGCGGTATGAACCAGCCACAAC
AAGGCGGTTGGGGACAGCCTCAACAACCAGCCATGCAGCAGCACAAACCAATGCAGCAGCAGGCACCGCAGCAATCTCAG
CCGCAATACAATGAACCGCCAATGGATTTTGATGACGACATCCCATTCTAA
ATGGCAACCCGTGGCGTGAATAAAGTAATTTTGGTTGGCAACTTGGGTAGTGATCCGGAAGTTCGCTATATGCCAAGCGG
TGGCGCAGTTGCGAACATCACTGTAGCCACGTCAGAATCATGGCGTGATAAAGCAACCGGCGAACAGCGTGAGAAAACAG
AATGGCACCGTGTCGCTCTGTATGGAAAACTCGCAGAAGTCGCAGGTGAGTATCTGCGCAAAGGTTCTCAGGTTTACATC
GAAGGCCAGCTGCAAACACGTAAGTGGCAAGATCAAAGCGGTCAGGACCGCTACTCAACCGAAATCGTTGTACAGGGCTA
CAATGGCACTATGCAGATGCTCGGTGGCCGTCAGCAAGGTGGTATGCCTGCTCAGGGTGGCGGTATGAACCAGCCACAAC
AAGGCGGTTGGGGACAGCCTCAACAACCAGCCATGCAGCAGCACAAACCAATGCAGCAGCAGGCACCGCAGCAATCTCAG
CCGCAATACAATGAACCGCCAATGGATTTTGATGACGACATCCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
89.385 |
100 |
0.909 |
| ssb | Glaesserella parasuis strain SC1401 |
55.738 |
100 |
0.58 |
| ssb | Neisseria meningitidis MC58 |
46.739 |
100 |
0.489 |
| ssb | Neisseria gonorrhoeae MS11 |
46.739 |
100 |
0.489 |