Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACB355_RS09425 Genome accession   NZ_CP167011
Coordinates   1886076..1887299 (+) Length   407 a.a.
NCBI ID   WP_002994926.1    Uniprot ID   A0A4U9TAA9
Organism   Streptococcus pyogenes strain Isolate 18     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1881076..1892299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB355_RS09410 (ACB355_09410) - 1884218..1884992 (-) 775 Protein_1793 IS30 family transposase -
  ACB355_RS09420 (ACB355_09420) rlmH 1885385..1885864 (-) 480 WP_023078617.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACB355_RS09425 (ACB355_09425) htrA 1886076..1887299 (+) 1224 WP_002994926.1 S1C family serine protease Regulator
  ACB355_RS09430 (ACB355_09430) spo0J 1887388..1888164 (+) 777 WP_014407987.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42760.38 Da        Isoelectric Point: 7.3920

>NTDB_id=1037447 ACB355_RS09425 WP_002994926.1 1886076..1887299(+) (htrA) [Streptococcus pyogenes strain Isolate 18]
MPSMKHILKSLSILLIGFLGGLIAIITFNNLYPHSPSKINSGKATTSNMVFNNTTNTTKAVKAVQNAVVSVINYQDNPSS
SLSNPYTKLFGEGRSKENKDAELSIFSEGSGVIYRKDGNSAYVVTNNHVIDGAKRIEILMADGSKVVGELVGADTYSDLA
VVKISSDKIKTVAEFADSTKLNVGEVAIAIGSPLGTQYANSVTQGIVSSLSRTVTLKNENGETVSTNAIQTDAAINPGNS
GGPLINIEGQVIGINSSKISSTPTGSNGNSGAVEGIGFAIPSTDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALSQ
INIPTSVTGGIVVAEVKEGMPASGKLAQYDVITEIDGKTVNSISDLQSSLYGHDINDTIKVTFYRGTTKKKADIKLTKTT
QDLTKTQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=1037447 ACB355_RS09425 WP_002994926.1 1886076..1887299(+) (htrA) [Streptococcus pyogenes strain Isolate 18]
ATGCCAAGTATGAAACATATCTTAAAATCCTTAAGTATTTTATTAATTGGATTTTTAGGAGGATTAATAGCAATTATTAC
ATTCAATAATCTCTACCCACATTCTCCTTCAAAAATAAATTCAGGTAAGGCAACAACTAGTAATATGGTTTTTAACAACA
CAACCAATACTACTAAAGCTGTCAAAGCTGTTCAAAATGCAGTTGTATCAGTTATTAATTATCAAGATAACCCTTCTTCA
TCCCTTTCTAACCCTTATACAAAACTCTTTGGAGAAGGGCGTTCAAAAGAGAATAAGGATGCTGAATTATCTATTTTTAG
TGAAGGATCTGGGGTCATTTATCGAAAAGATGGCAACTCCGCTTACGTTGTTACTAATAACCATGTTATCGACGGAGCTA
AACGAATTGAAATTCTTATGGCAGACGGATCTAAAGTTGTTGGTGAATTAGTTGGAGCTGATACTTATTCGGATTTAGCT
GTTGTTAAGATCTCTTCAGATAAGATAAAAACAGTAGCTGAATTTGCAGATTCTACAAAACTAAATGTTGGAGAAGTTGC
TATTGCTATCGGCAGCCCACTAGGAACACAATACGCTAATTCTGTTACTCAAGGAATCGTCTCTAGTTTAAGTCGTACTG
TAACTTTAAAAAACGAGAATGGTGAGACTGTCTCAACAAATGCTATTCAGACAGATGCTGCTATTAACCCTGGAAACTCT
GGTGGACCACTAATTAATATTGAGGGGCAAGTAATCGGAATTAATTCAAGTAAAATTTCTTCTACCCCAACTGGTAGCAA
CGGTAATAGTGGTGCTGTTGAAGGAATTGGTTTTGCTATCCCATCTACTGATGTTATTAAAATTATTAAACAACTAGAAA
CTAATGGTGAAGTTATCAGACCTGCTCTTGGAATATCCATGGTCAATTTAAATGACTTATCCACAAATGCTCTTAGTCAA
ATTAATATTCCAACTAGTGTAACTGGTGGTATTGTAGTAGCAGAAGTTAAGGAAGGAATGCCGGCATCTGGCAAACTTGC
TCAGTACGATGTGATTACAGAAATTGATGGCAAAACAGTTAATTCAATTAGTGATTTACAAAGTAGTCTATACGGACACG
ATATTAATGATACTATTAAAGTAACTTTTTATAGAGGAACTACAAAGAAAAAAGCAGATATCAAATTAACAAAAACTACT
CAAGATTTGACTAAAACGCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9TAA9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.881

99.263

0.614

  htrA Streptococcus gordonii str. Challis substr. CH1

55.224

98.771

0.545

  htrA Streptococcus mitis NCTC 12261

53.071

100

0.531

  htrA Streptococcus pneumoniae Rx1

52.826

100

0.528

  htrA Streptococcus pneumoniae D39

52.826

100

0.528

  htrA Streptococcus pneumoniae R6

52.826

100

0.528

  htrA Streptococcus pneumoniae TIGR4

52.826

100

0.528


Multiple sequence alignment