Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   ACB348_RS07890 Genome accession   NZ_CP167002
Coordinates   1541305..1541541 (+) Length   78 a.a.
NCBI ID   WP_002994577.1    Uniprot ID   A0A660A565
Organism   Streptococcus pyogenes strain Isolate 30     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1536305..1546541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB348_RS07855 (ACB348_07855) - 1537627..1538699 (-) 1073 Protein_1493 IS3 family transposase -
  ACB348_RS07860 (ACB348_07860) - 1538819..1539136 (-) 318 WP_002994587.1 hypothetical protein -
  ACB348_RS07865 (ACB348_07865) - 1539185..1539412 (-) 228 WP_028797129.1 Blp family class II bacteriocin -
  ACB348_RS07870 (ACB348_07870) - 1539810..1539938 (-) 129 WP_002994583.1 hypothetical protein -
  ACB348_RS07875 (ACB348_07875) - 1540023..1540334 (-) 312 WP_225793061.1 CPBP family intramembrane glutamic endopeptidase -
  ACB348_RS07880 (ACB348_07880) - 1540629..1540805 (-) 177 WP_002994581.1 hypothetical protein -
  ACB348_RS07885 (ACB348_07885) - 1540783..1541007 (-) 225 WP_002994580.1 Blp family class II bacteriocin -
  ACB348_RS07890 (ACB348_07890) comA/nlmT 1541305..1541541 (+) 237 WP_002994577.1 cysteine peptidase family C39 domain-containing protein Regulator
  ACB348_RS07895 (ACB348_07895) - 1541646..1542431 (+) 786 Protein_1501 ABC transporter transmembrane domain-containing protein -
  ACB348_RS07900 (ACB348_07900) comA/nlmT 1542420..1543088 (+) 669 WP_136076166.1 ATP-binding cassette domain-containing protein Regulator
  ACB348_RS07905 (ACB348_07905) - 1543171..1543389 (-) 219 WP_072135532.1 LytTR family transcriptional regulator DNA-binding domain-containing protein -
  ACB348_RS07910 (ACB348_07910) - 1543690..1543944 (+) 255 WP_011106868.1 hypothetical protein -
  ACB348_RS07915 (ACB348_07915) - 1544250..1544726 (-) 477 WP_014635332.1 NUDIX hydrolase -
  ACB348_RS07920 (ACB348_07920) era 1544746..1545642 (-) 897 WP_014635331.1 GTPase Era -
  ACB348_RS07925 (ACB348_07925) - 1545762..1546169 (-) 408 WP_002985746.1 diacylglycerol kinase family protein -

Sequence

Protein


Download         Length: 78 a.a.        Molecular weight: 8518.91 Da        Isoelectric Point: 9.1575

>NTDB_id=1036939 ACB348_RS07890 WP_002994577.1 1541305..1541541(+) (comA/nlmT) [Streptococcus pyogenes strain Isolate 30]
MTSCKRTFVPQIDARDCGIAALASIAKFYGSDYSLTHLRELAKTNKEGTTTLGIVKAAKEMGFEKNISSLEIQIPPLK

Nucleotide


Download         Length: 237 bp        

>NTDB_id=1036939 ACB348_RS07890 WP_002994577.1 1541305..1541541(+) (comA/nlmT) [Streptococcus pyogenes strain Isolate 30]
ATGACATCATGTAAACGTACGTTTGTACCACAAATTGATGCAAGAGATTGTGGAATTGCTGCTCTAGCTTCGATTGCAAA
ATTCTACGGGTCTGATTACTCTTTGACACATCTGAGAGAATTGGCAAAGACTAATAAAGAAGGAACAACAACCCTTGGAA
TCGTAAAAGCGGCCAAGGAGATGGGCTTTGAAAAGAACATTTCATCATTGGAGATCCAGATCCCTCCGTTAAAGTAA

Domains

Predicted by InterProScan.

Peptidase C39 family (Peptidase_C39)

(7-70)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

71.93

73.077

0.526
  comA Streptococcus mitis NCTC 12261

61.667

76.923

0.474
  comA Streptococcus mitis SK321

61.667

76.923

0.474
  comA Streptococcus pneumoniae Rx1

60

76.923

0.462
  comA Streptococcus pneumoniae D39

60

76.923

0.462
  comA Streptococcus pneumoniae R6

60

76.923

0.462
  comA Streptococcus pneumoniae TIGR4

60

76.923

0.462
  comA Streptococcus gordonii str. Challis substr. CH1

53.125

82.051

0.436

Multiple sequence alignment