Detailed information NTG1036478

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACA097_RS14835
• Genome accession: NZ_CP166971
• Coordinates: 3152247..3153311 (+)
• Length: 354 a.a.
• NCBI ID: WP_371364173.1
• Uniprot ID: -
• Organism: Pseudomonas sp. QL9
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3147247..3158311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACA097_RS14815 (ACA097_14810)	-	3147636..3148061 (+)	426	WP_043255947.1	hypothetical protein	-
ACA097_RS14820 (ACA097_14815)	-	3148103..3148873 (+)	771	WP_371364168.1	methyltransferase domain-containing protein	-
ACA097_RS14825 (ACA097_14820)	-	3148937..3149428 (+)	492	WP_043257828.1	YgjP-like metallopeptidase domain-containing protein	-
ACA097_RS14830 (ACA097_14825)	-	3149620..3152061 (-)	2442	WP_371364171.1	penicillin-binding protein 1A	-
ACA097_RS14835 (ACA097_14830)	comM	3152247..3153311 (+)	1065	WP_371364173.1	pilus assembly protein PilM	Machinery gene
ACA097_RS14840 (ACA097_14835)	pilN	3153311..3153910 (+)	600	WP_043255938.1	type 4a pilus biogenesis protein PilN	-
ACA097_RS14845 (ACA097_14840)	pilO	3153907..3154587 (+)	681	WP_052355394.1	type 4a pilus biogenesis protein PilO	-
ACA097_RS14850 (ACA097_14845)	pilP	3154584..3155108 (+)	525	WP_043255936.1	type 4a pilus biogenesis lipoprotein PilP	-
ACA097_RS14855 (ACA097_14850)	pilQ	3155166..3157253 (+)	2088	WP_160288625.1	type IV pilus secretin PilQ	Machinery gene
ACA097_RS14860 (ACA097_14855)	aroK	3157262..3157780 (+)	519	WP_371364176.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37727.07 Da
• Isoelectric Point: 4.4567

>NTDB_id=1036478 ACA097_RS14835 WP_371364173.1 3152247..3153311(+) (comM) [Pseudomonas sp. QL9]
MLGLFNKKANTLLGIDISSTSVKLLELSRSGGRFKVEAYAVEPLPPNAVVEKNIAELEGVGQALSRVVAKARTGVKTAAV
AVAGSAVITKSIEMDAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGVSARNAERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERAFGLLGDQLGGNADELTIAVVDIGATMTTLSVLHHGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYESEVLQPFKDAVVQQVSRSLQFFFAAGQFNDVDYILLAGGTASIPDLDRLIQQKIGTPTLVANP
FADMALSSKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1036478 ACA097_RS14835 WP_371364173.1 3152247..3153311(+) (comM) [Pseudomonas sp. QL9]
GTGCTAGGGCTCTTCAATAAGAAAGCGAACACACTGCTGGGGATCGACATCAGTTCGACTTCGGTCAAGCTCCTTGAGTT
GAGCCGCTCCGGTGGCCGCTTCAAGGTCGAGGCTTACGCGGTCGAGCCGCTGCCCCCGAACGCGGTGGTAGAAAAGAACA
TCGCCGAACTGGAGGGGGTCGGCCAGGCGCTGTCGCGCGTGGTCGCCAAGGCGCGCACCGGCGTGAAAACCGCCGCCGTC
GCCGTCGCCGGATCGGCGGTCATCACCAAATCCATCGAGATGGATGCTGGCCTCTCCGAGGATGAGCTGGAAAACCAGCT
CAAGATCGAGGCGGACCAGTACATCCCCTACCCCCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGGGTATCGGCTC
GCAACGCTGAGCGCGTCGATGTGCTCCTGGCGGCCTGCCGCAAGGAAAACGTCGAGGTGCGCGAAGCTGCGCTGGCGCTT
GCAGGGCTGACCGCCAAGGTGGTCGATGTCGAGGCCTACGCCCTGGAGCGCGCCTTCGGTCTGCTCGGTGACCAGTTGGG
CGGTAACGCCGATGAGCTGACGATCGCTGTGGTCGACATTGGCGCGACCATGACGACCCTGAGCGTGCTGCACCACGGCC
GCACTATCTATACCCGTGAGCAACTGTTCGGCGGGCGCCAACTTACCGAAGAGATCCAGCGTCGCTATGGTCTGTCGGTC
GAAGAGGCTGGCCTGGCGAAGAAACAGGGCGGGCTCCCGGACGACTACGAAAGCGAAGTGCTGCAGCCGTTCAAGGATGC
GGTGGTTCAGCAGGTGTCCCGTTCCCTGCAGTTCTTCTTCGCCGCAGGTCAGTTCAACGACGTCGATTACATCCTGCTCG
CCGGTGGCACGGCTTCGATCCCGGATCTGGATCGCCTGATCCAGCAGAAGATCGGCACGCCCACCCTGGTAGCCAACCCC
TTCGCCGACATGGCCCTGAGCAGCAAGGTGAACGCCGGGGCGCTGGCCAGTGATGCGCCCGCGCTGATGATTGCCTGCGG
TCTGGCGATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	57.345	100	0.573
pilM	Acinetobacter baumannii D1279779	57.345	100	0.573
comM	Acinetobacter baylyi ADP1	52.825	100	0.528
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463