Detailed information NTG1036345

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACAY00_RS11835
• Genome accession: NZ_CP166961
• Coordinates: 2651281..2652408 (-)
• Length: 375 a.a.
• NCBI ID: WP_371373880.1
• Uniprot ID: -
• Organism: Thalassotalea aquiviva strain 273M-4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2646281..2657408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAY00_RS11810	ruvX	2646768..2647208 (-)	441	WP_371373869.1	Holliday junction resolvase RuvX	-
ACAY00_RS11815	-	2647259..2647813 (-)	555	WP_371373871.1	YqgE/AlgH family protein	-
ACAY00_RS11820	gshB	2647963..2648922 (-)	960	WP_371373873.1	glutathione synthase	-
ACAY00_RS11825	rsmE	2648954..2649685 (-)	732	WP_371373875.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
ACAY00_RS11830	metK	2649818..2651005 (-)	1188	WP_371373878.1	methionine adenosyltransferase	-
ACAY00_RS11835	pilU	2651281..2652408 (-)	1128	WP_371373880.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACAY00_RS11840	pilT	2652423..2653466 (-)	1044	WP_371373883.1	type IV pilus twitching motility protein PilT	Machinery gene
ACAY00_RS11845	-	2653502..2654185 (+)	684	WP_371373885.1	YggS family pyridoxal phosphate-dependent enzyme	-
ACAY00_RS11850	proC	2654247..2655065 (+)	819	WP_371373888.1	pyrroline-5-carboxylate reductase	-
ACAY00_RS11855	-	2655139..2655687 (+)	549	WP_371373890.1	YggT family protein	-
ACAY00_RS11860	-	2655851..2656216 (+)	366	WP_371373893.1	DUF4426 domain-containing protein	-
ACAY00_RS11865	-	2656296..2656889 (+)	594	WP_371373896.1	XTP/dITP diphosphatase	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41820.13 Da
• Isoelectric Point: 6.6222

>NTDB_id=1036345 ACAY00_RS11835 WP_371373880.1 2651281..2652408(-) (pilU) [Thalassotalea aquiviva strain 273M-4]
MYLHQLLKTMVERSASDLFITVKLQPSAKINGELTPIDTQVLTPETTLELVESAMTERQKKEFHQDKECNFALSLEDVGR
FRISAFWQREMPGMVVRRIVTEIPDVDRMGLPSILKDLVMSKRGLLLFVGGTGTGKSTSMASLIGYRNHNARGHILTIED
PVEFVHEHDRSMITQREVGLDTESFDAALKSSLRQAPDVILIGEIRSREIMEHALSFAETGHLCIATLHANNANQAIDRI
MHLVPAEQHGKLLFDLALNLRGVIAQQLVPTRDGRGRKAAIEILINSPYIAELIKKGKISEIKEVMSKSRELGMQTFDQA
LFDLYQSGHISYTDALHHADSPNDLRLMIKLKGNKEGGSTVTGMKGLTLDSLDSD

Nucleotide

• Length: 1128 bp

>NTDB_id=1036345 ACAY00_RS11835 WP_371373880.1 2651281..2652408(-) (pilU) [Thalassotalea aquiviva strain 273M-4]
ATGTATTTGCATCAGTTGCTCAAGACCATGGTCGAGCGAAGCGCATCCGATTTATTCATCACGGTTAAATTACAGCCAAG
TGCGAAAATCAACGGTGAATTAACCCCAATAGATACGCAAGTTTTGACTCCAGAAACCACGCTTGAGCTGGTTGAGAGTG
CGATGACTGAGCGCCAAAAGAAAGAATTTCATCAAGACAAAGAGTGTAACTTTGCGCTATCGCTTGAAGATGTTGGGCGC
TTTCGTATTTCGGCTTTTTGGCAACGCGAAATGCCGGGCATGGTTGTTCGTCGAATCGTTACCGAAATACCGGATGTTGA
CAGAATGGGGTTGCCTTCCATCTTAAAAGATTTGGTGATGAGTAAACGTGGCCTACTGCTGTTTGTTGGTGGTACCGGTA
CTGGTAAATCAACATCGATGGCGTCGTTAATCGGTTATCGAAACCATAATGCTCGTGGACATATTTTAACCATTGAAGAT
CCGGTTGAGTTTGTGCATGAACATGATCGTTCTATGATCACCCAGCGAGAAGTCGGTCTCGATACGGAATCTTTTGACGC
CGCCCTAAAGAGTTCATTAAGACAAGCGCCTGATGTCATTCTTATTGGTGAAATCCGCTCAAGAGAAATCATGGAGCACG
CTTTAAGTTTTGCTGAAACCGGTCATTTATGTATTGCGACTTTGCATGCTAATAATGCCAACCAAGCCATTGACCGAATT
ATGCATTTAGTTCCCGCAGAGCAACATGGTAAGTTGTTGTTTGACTTGGCATTAAATTTACGAGGCGTTATTGCTCAGCA
ATTGGTACCGACAAGGGATGGACGCGGGCGAAAAGCCGCTATTGAGATTTTAATTAACTCACCTTATATTGCCGAGCTGA
TCAAAAAAGGCAAAATCAGTGAAATTAAAGAAGTCATGAGTAAATCTCGAGAGCTTGGAATGCAGACATTCGATCAGGCT
CTATTTGATTTATACCAAAGCGGGCATATCAGTTATACCGATGCGCTACATCATGCCGACTCACCAAACGATTTGCGCTT
AATGATTAAGTTAAAAGGTAACAAAGAAGGCGGTAGCACCGTAACAGGAATGAAAGGGCTGACCCTTGATAGTCTAGATT
CCGACTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (114-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.6	100	0.576
pilU	Acinetobacter baylyi ADP1	60.511	93.867	0.568
pilU	Vibrio cholerae strain A1552	56.825	95.733	0.544
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.737	95.2	0.397