Detailed information NTG1035861

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACAW63_RS02125
• Genome accession: NZ_CP166873
• Coordinates: 471052..472116 (-)
• Length: 354 a.a.
• NCBI ID: WP_207882126.1
• Uniprot ID: -
• Organism: Pseudomonas sp. QE6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 466052..477116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAW63_RS02100 (ACAW63_02100)	aroK	466572..467063 (-)	492	WP_371234550.1	shikimate kinase AroK	-
ACAW63_RS02105 (ACAW63_02105)	pilQ	467099..469237 (-)	2139	WP_371231341.1	type IV pilus secretin PilQ	Machinery gene
ACAW63_RS02110 (ACAW63_02110)	pilP	469291..469815 (-)	525	WP_371231342.1	type 4a pilus biogenesis lipoprotein PilP	-
ACAW63_RS02115 (ACAW63_02115)	pilO	469812..470462 (-)	651	WP_371231343.1	type 4a pilus biogenesis protein PilO	-
ACAW63_RS02120 (ACAW63_02120)	pilN	470459..471052 (-)	594	WP_275608990.1	type 4a pilus biogenesis protein PilN	-
ACAW63_RS02125 (ACAW63_02125)	pilM	471052..472116 (-)	1065	WP_207882126.1	pilus assembly protein PilM	Machinery gene
ACAW63_RS02130 (ACAW63_02130)	-	472302..474740 (+)	2439	WP_371231346.1	penicillin-binding protein 1A	-
ACAW63_RS02135 (ACAW63_02135)	-	475060..475389 (+)	330	WP_371231348.1	hypothetical protein	-
ACAW63_RS02140 (ACAW63_02140)	-	475383..475877 (-)	495	WP_371231350.1	M48 family metallopeptidase	-
ACAW63_RS02145 (ACAW63_02145)	-	475929..476699 (-)	771	WP_371231351.1	methyltransferase domain-containing protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37761.04 Da
• Isoelectric Point: 4.4526

>NTDB_id=1035861 ACAW63_RS02125 WP_207882126.1 471052..472116(-) (pilM) [Pseudomonas sp. QE6]
MLGLFNKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIAELEGVGQALSRVVAKARTGVKTAAV
AVAGSAVITKTIEMDGGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGASARNAERVDVLLAACRKENVEVREAALAL
SGLTAKVVDVEAYALERAFSLLGDQLGGNADELTVAVVDIGATMTTLSVLHHGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLQPFKDAVVQQVSRSLQFFFAAGQFNDVDYILLAGGTASIPDLDRLIQQKIGTPTLVANP
FTDMVLSGKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1035861 ACAW63_RS02125 WP_207882126.1 471052..472116(-) (pilM) [Pseudomonas sp. QE6]
GTGCTAGGGCTATTCAATAAGAAAGCGAACACGCTGCTGGGGATAGACATCAGTTCGACTTCGGTCAAACTCCTCGAACT
GAGCCGCTCGGGAGGCCGCTACAAGGTAGAGGCCTACGCCGTGGAGCCGCTCCCTCCCAATGCAGTGGTAGAAAAGAACA
TCGCTGAGCTGGAGGGTGTCGGCCAGGCGTTGTCACGTGTGGTCGCCAAGGCGCGCACCGGCGTGAAGACGGCTGCGGTC
GCGGTCGCTGGCTCGGCGGTCATTACCAAGACCATCGAGATGGATGGCGGTCTCTCGGAAGACGAGCTGGAGAATCAGCT
CAAGATCGAGGCCGACCAGTACATTCCCTATCCCCTCGAAGAAGTCGCGATCGACTTTGAAGTCCAGGGCGCATCCGCAC
GGAACGCCGAGCGTGTAGACGTACTCCTCGCCGCTTGTCGGAAGGAAAACGTTGAGGTGCGCGAGGCGGCTCTGGCGCTG
TCGGGCCTGACCGCCAAGGTCGTCGATGTCGAGGCCTACGCGCTGGAGCGAGCGTTCAGTCTGCTCGGCGATCAGCTGGG
TGGCAATGCCGACGAACTCACAGTTGCGGTGGTCGACATCGGCGCCACCATGACCACGCTGAGTGTGCTGCACCACGGCC
GCACCATCTATACGCGTGAGCAGCTGTTCGGCGGGCGTCAGCTCACCGAGGAGATTCAGCGTCGCTATGGCCTGTCAGTG
GAGGAAGCCGGTCTTGCCAAGAAGCAGGGCGGTCTTCCGGATGACTATGACAGCGAGGTTCTGCAACCGTTCAAGGATGC
GGTCGTCCAGCAGGTCTCCCGTTCGCTGCAGTTCTTCTTCGCCGCCGGTCAGTTCAACGACGTGGACTACATCCTGCTGG
CGGGCGGAACGGCTTCCATTCCGGACCTGGACAGATTGATCCAGCAGAAGATCGGTACTCCGACACTCGTGGCCAACCCC
TTCACCGACATGGTGCTGAGCGGAAAGGTCAATGCGGGGGCGCTGGCAAGTGACGCGCCTGCGCTGATGATTGCCTGCGG
TCTGGCGATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	57.062	100	0.571
comM	Acinetobacter nosocomialis M2	57.062	100	0.571
comM	Acinetobacter baylyi ADP1	53.107	100	0.531
pilM	Legionella pneumophila strain ERS1305867	46.045	100	0.46