Detailed information NTG0103459

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QUE75_RS04130
• Genome accession: NZ_AP028062
• Coordinates: 892470..893534 (+)
• Length: 354 a.a.
• NCBI ID: WP_106693177.1
• Uniprot ID: -
• Organism: Marinobacter shengliensis strain D49
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 887470..898534

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE75_RS04115 (MAALD49_08080)	rpmE	887909..888130 (+)	222	WP_061332390.1	50S ribosomal protein L31	-
QUE75_RS04120 (MAALD49_08090)	-	888347..889612 (+)	1266	WP_061332389.1	malic enzyme-like NAD(P)-binding protein	-
QUE75_RS04125 (MAALD49_08100)	-	889703..892231 (-)	2529	WP_286253828.1	penicillin-binding protein 1A	-
QUE75_RS04130 (MAALD49_08110)	pilM	892470..893534 (+)	1065	WP_106693177.1	pilus assembly protein PilM	Machinery gene
QUE75_RS04135 (MAALD49_08120)	-	893534..894097 (+)	564	WP_286253830.1	PilN domain-containing protein	-
QUE75_RS04140 (MAALD49_08130)	-	894097..894708 (+)	612	WP_286253832.1	type 4a pilus biogenesis protein PilO	-
QUE75_RS04145 (MAALD49_08140)	-	894711..895253 (+)	543	WP_061332384.1	pilus assembly protein PilP	-
QUE75_RS04150 (MAALD49_08150)	pilQ	895272..897386 (+)	2115	WP_286253836.1	type IV pilus secretin PilQ	Machinery gene
QUE75_RS04155 (MAALD49_08160)	aroK	897510..898094 (+)	585	WP_058090087.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38106.23 Da
• Isoelectric Point: 4.1974

>NTDB_id=103459 QUE75_RS04130 WP_106693177.1 892470..893534(+) (pilM) [Marinobacter shengliensis strain D49]
MFGLLGKKSSAVLGVDVSSSSVKLLELSRHGDRYKVESYAVEPLPANAVVEKNITDVEAVGEVLKRVASKSRTSVKQVAV
AVSGSAVITKVIQMDGGLNEFEMEDQITLEADQYIPYPLDEVAIDFEVQGPSESNPDQVDVLLAACRKENVDIREDALEI
AGLTTKIVDVEAYALERAYKLIEPQLESQGEELVVAIVDIGATMTTLSVLAEGKTVYTREQIFGGKQLTEEIQRRYGLSL
EEAGLAKKQGGLPDDYEPEVLTPFREAVVQQVARALQFFFGASQYNAVDYVVLAGGTASIQGLTEMVEEKTGTPTLVANP
FADMAVGSRVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=103459 QUE75_RS04130 WP_106693177.1 892470..893534(+) (pilM) [Marinobacter shengliensis strain D49]
GTGTTCGGATTGCTAGGAAAAAAATCCAGTGCAGTGCTGGGCGTGGATGTCAGCTCCAGCTCGGTCAAACTTCTGGAACT
GTCAAGGCATGGCGACCGTTACAAGGTCGAAAGCTATGCGGTTGAGCCGTTGCCGGCCAACGCAGTTGTCGAGAAAAACA
TCACTGATGTAGAAGCGGTGGGTGAGGTGCTCAAGCGAGTGGCCTCTAAGTCCCGTACCAGCGTTAAGCAGGTTGCCGTG
GCTGTGTCAGGTTCTGCGGTTATCACCAAGGTCATCCAGATGGATGGCGGCCTCAACGAGTTCGAGATGGAAGACCAGAT
CACCCTCGAGGCCGATCAGTACATCCCGTATCCGCTGGATGAAGTAGCCATCGATTTTGAGGTGCAGGGTCCGTCTGAGT
CGAATCCGGACCAGGTCGACGTGCTGCTGGCTGCGTGCAGAAAAGAGAACGTGGATATCCGTGAGGACGCTCTCGAGATT
GCCGGCCTGACCACCAAGATTGTCGATGTCGAGGCCTATGCACTGGAAAGGGCGTACAAACTGATCGAGCCCCAGTTGGA
GTCCCAGGGCGAAGAGCTGGTGGTTGCCATCGTCGATATCGGCGCAACCATGACCACGCTGAGTGTGCTGGCTGAGGGTA
AGACAGTTTATACCCGTGAGCAGATTTTCGGGGGCAAGCAGCTTACCGAGGAAATTCAGCGCCGCTACGGCTTATCACTT
GAAGAAGCCGGTCTCGCGAAGAAACAGGGCGGGCTTCCGGACGACTATGAGCCGGAGGTCCTTACCCCCTTCCGTGAAGC
GGTTGTGCAGCAAGTTGCACGCGCTCTCCAGTTCTTCTTTGGTGCCAGCCAGTACAACGCCGTTGATTACGTCGTTCTTG
CAGGCGGTACGGCATCCATTCAGGGCCTGACCGAGATGGTGGAGGAGAAGACCGGTACGCCAACCCTGGTTGCGAATCCA
TTCGCCGACATGGCCGTGGGTTCCAGGGTGAATGCATCAGCCCTGAGCAATGATGCTCCATCGTTGATGATTGCCTGCGG
CCTGGCAATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	53.672	100	0.537
comM	Acinetobacter nosocomialis M2	53.672	100	0.537
comM	Acinetobacter baylyi ADP1	51.412	100	0.514
pilM	Legionella pneumophila strain ERS1305867	45.763	100	0.458