Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | QUE75_RS03720 | Genome accession | NZ_AP028062 |
| Coordinates | 797336..797878 (+) | Length | 180 a.a. |
| NCBI ID | WP_061333574.1 | Uniprot ID | - |
| Organism | Marinobacter shengliensis strain D49 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 792336..802878
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE75_RS03705 (MAALD49_07220) | rplQ | 792445..792843 (+) | 399 | WP_058090008.1 | 50S ribosomal protein L17 | - |
| QUE75_RS03710 (MAALD49_07230) | uvrA | 792909..795728 (-) | 2820 | WP_286253709.1 | excinuclease ABC subunit UvrA | - |
| QUE75_RS03715 (MAALD49_07250) | - | 795909..797279 (+) | 1371 | WP_286253711.1 | MFS transporter | - |
| QUE75_RS03720 (MAALD49_07260) | ssb | 797336..797878 (+) | 543 | WP_061333574.1 | single-stranded DNA-binding protein | Machinery gene |
| QUE75_RS03725 (MAALD49_07270) | - | 798070..799014 (+) | 945 | WP_286253712.1 | biogenesis protein MshI | - |
| QUE75_RS03730 (MAALD49_07280) | - | 799011..799631 (+) | 621 | WP_227510293.1 | PilN domain-containing protein | - |
| QUE75_RS03735 (MAALD49_07290) | gspM | 799628..800305 (+) | 678 | WP_286253716.1 | type II secretion system protein GspM | - |
| QUE75_RS03740 (MAALD49_07300) | - | 800307..800636 (+) | 330 | WP_061333576.1 | hypothetical protein | - |
| QUE75_RS03745 (MAALD49_07310) | mshL | 800633..802342 (+) | 1710 | WP_286253719.1 | pilus (MSHA type) biogenesis protein MshL | - |
Sequence
Protein
Download Length: 180 a.a. Molecular weight: 19873.97 Da Isoelectric Point: 4.9464
>NTDB_id=103458 QUE75_RS03720 WP_061333574.1 797336..797878(+) (ssb) [Marinobacter shengliensis strain D49]
MARGINKVILIGNLGQDPDTRYTPNGNAVVNLNLATDESYKDRQTGQMVPRTEWHRVVLFGKVAEVAGQYLRKGSKVYIE
GRLQTRKWQNKEGQDVYTTEIVVDINGQMQMLDSRGGEGGMNQGAPQGRPQQQPQSQYNAPPQQQGGQAQQPSGGYNPQG
QQQAGGMPEPIDDFDDDIPF
MARGINKVILIGNLGQDPDTRYTPNGNAVVNLNLATDESYKDRQTGQMVPRTEWHRVVLFGKVAEVAGQYLRKGSKVYIE
GRLQTRKWQNKEGQDVYTTEIVVDINGQMQMLDSRGGEGGMNQGAPQGRPQQQPQSQYNAPPQQQGGQAQQPSGGYNPQG
QQQAGGMPEPIDDFDDDIPF
Nucleotide
Download Length: 543 bp
>NTDB_id=103458 QUE75_RS03720 WP_061333574.1 797336..797878(+) (ssb) [Marinobacter shengliensis strain D49]
ATGGCACGAGGCATTAACAAGGTAATTCTCATTGGTAATCTGGGCCAGGATCCGGATACCCGCTATACCCCGAATGGCAA
CGCGGTTGTGAATCTCAACCTGGCTACCGATGAAAGTTACAAGGATCGCCAGACTGGCCAGATGGTACCGAGAACCGAAT
GGCACCGGGTTGTGCTGTTCGGCAAGGTGGCAGAAGTGGCCGGCCAGTACCTGCGTAAAGGTTCCAAGGTGTATATCGAA
GGTCGCCTGCAAACCCGCAAGTGGCAGAATAAAGAAGGGCAGGACGTATACACCACCGAGATTGTGGTAGACATCAACGG
CCAGATGCAGATGCTCGACAGCCGCGGTGGCGAGGGTGGCATGAACCAGGGAGCTCCCCAGGGTCGTCCGCAGCAGCAAC
CCCAATCTCAGTATAATGCTCCGCCCCAGCAGCAGGGTGGCCAGGCGCAGCAGCCGTCCGGGGGTTACAACCCTCAGGGT
CAGCAGCAGGCCGGTGGCATGCCGGAACCGATTGATGATTTTGATGACGACATTCCGTTCTGA
ATGGCACGAGGCATTAACAAGGTAATTCTCATTGGTAATCTGGGCCAGGATCCGGATACCCGCTATACCCCGAATGGCAA
CGCGGTTGTGAATCTCAACCTGGCTACCGATGAAAGTTACAAGGATCGCCAGACTGGCCAGATGGTACCGAGAACCGAAT
GGCACCGGGTTGTGCTGTTCGGCAAGGTGGCAGAAGTGGCCGGCCAGTACCTGCGTAAAGGTTCCAAGGTGTATATCGAA
GGTCGCCTGCAAACCCGCAAGTGGCAGAATAAAGAAGGGCAGGACGTATACACCACCGAGATTGTGGTAGACATCAACGG
CCAGATGCAGATGCTCGACAGCCGCGGTGGCGAGGGTGGCATGAACCAGGGAGCTCCCCAGGGTCGTCCGCAGCAGCAAC
CCCAATCTCAGTATAATGCTCCGCCCCAGCAGCAGGGTGGCCAGGCGCAGCAGCCGTCCGGGGGTTACAACCCTCAGGGT
CAGCAGCAGGCCGGTGGCATGCCGGAACCGATTGATGATTTTGATGACGACATTCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
54.839 |
100 |
0.567 |
| ssb | Glaesserella parasuis strain SC1401 |
52.66 |
100 |
0.55 |
| ssb | Neisseria meningitidis MC58 |
45.109 |
100 |
0.461 |
| ssb | Neisseria gonorrhoeae MS11 |
45.109 |
100 |
0.461 |