Detailed information
Bioinformatically predicted
Overview
| Name | comM | Type | Machinery gene |
| Locus tag | QUE75_RS02965 | Genome accession | NZ_AP028062 |
| Coordinates | 650803..652329 (+) | Length | 508 a.a. |
| NCBI ID | WP_106694444.1 | Uniprot ID | - |
| Organism | Marinobacter shengliensis strain D49 | ||
| Function | require for natural transformation (predicted from homology) Unclear |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 584677..651271 | 650803..652329 | flank | -468 |
Gene organization within MGE regions
Location: 584677..652329
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE75_RS02665 (MAALD49_05270) | gshA | 586154..587710 (+) | 1557 | WP_286253431.1 | glutamate--cysteine ligase | - |
| QUE75_RS02670 (MAALD49_05280) | rmf | 587824..588036 (+) | 213 | WP_058091935.1 | ribosome modulation factor | - |
| QUE75_RS02675 (MAALD49_05290) | fliL | 588038..588463 (-) | 426 | WP_286253432.1 | flagellar basal body-associated protein FliL | - |
| QUE75_RS02680 (MAALD49_05300) | - | 588531..589037 (+) | 507 | WP_138436841.1 | disulfide bond formation protein B | - |
| QUE75_RS02685 (MAALD49_05310) | rsd | 589143..589622 (+) | 480 | WP_286253434.1 | sigma D regulator | - |
| QUE75_RS02690 (MAALD49_05320) | - | 589693..590406 (-) | 714 | WP_286253435.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| QUE75_RS02695 (MAALD49_05330) | - | 590530..590913 (-) | 384 | WP_072678671.1 | hypothetical protein | - |
| QUE75_RS02700 (MAALD49_05340) | - | 590910..591443 (-) | 534 | WP_286253446.1 | DUF2390 domain-containing protein | - |
| QUE75_RS02705 (MAALD49_05350) | - | 591488..593434 (+) | 1947 | WP_286253448.1 | ATP-binding cassette domain-containing protein | - |
| QUE75_RS02710 (MAALD49_05360) | ppx | 593436..594962 (-) | 1527 | WP_286253450.1 | exopolyphosphatase | - |
| QUE75_RS02715 (MAALD49_05370) | trxA | 595248..595574 (+) | 327 | WP_011784020.1 | thioredoxin TrxA | - |
| QUE75_RS02720 (MAALD49_05380) | - | 595669..596115 (-) | 447 | WP_286253460.1 | molybdenum cofactor biosynthesis protein MoaE | - |
| QUE75_RS02725 (MAALD49_05390) | moaD | 596117..596377 (-) | 261 | WP_286253462.1 | molybdopterin converting factor subunit 1 | - |
| QUE75_RS02730 (MAALD49_05400) | glp | 596380..597594 (-) | 1215 | WP_286253465.1 | gephyrin-like molybdotransferase Glp | - |
| QUE75_RS02735 (MAALD49_05410) | moaB | 597607..598179 (-) | 573 | WP_061332513.1 | molybdenum cofactor biosynthesis protein B | - |
| QUE75_RS02740 (MAALD49_05420) | rho | 598547..599809 (+) | 1263 | WP_058091947.1 | transcription termination factor Rho | - |
| QUE75_RS02745 (MAALD49_05430) | ubiD | 600032..601519 (+) | 1488 | WP_061332514.1 | 4-hydroxy-3-polyprenylbenzoate decarboxylase | - |
| QUE75_RS02750 (MAALD49_05440) | - | 601533..602525 (+) | 993 | WP_286253469.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| QUE75_RS02755 (MAALD49_05450) | - | 602587..603828 (-) | 1242 | WP_061332516.1 | heme biosynthesis HemY N-terminal domain-containing protein | - |
| QUE75_RS02760 (MAALD49_05460) | - | 603825..604937 (-) | 1113 | WP_286253472.1 | uroporphyrinogen-III C-methyltransferase | - |
| QUE75_RS02765 (MAALD49_05470) | - | 604924..605763 (-) | 840 | WP_286253474.1 | uroporphyrinogen-III synthase | - |
| QUE75_RS02770 (MAALD49_05480) | hemC | 605744..606685 (-) | 942 | WP_061332518.1 | hydroxymethylbilane synthase | - |
| QUE75_RS02775 (MAALD49_05490) | - | 606771..607526 (-) | 756 | WP_061332519.1 | LytTR family DNA-binding domain-containing protein | - |
| QUE75_RS02780 (MAALD49_05500) | - | 607557..608645 (-) | 1089 | WP_396631684.1 | sensor histidine kinase | - |
| QUE75_RS02785 (MAALD49_05510) | argH | 608705..610120 (+) | 1416 | WP_106694422.1 | argininosuccinate lyase | - |
| QUE75_RS02790 (MAALD49_05520) | - | 610271..612358 (+) | 2088 | WP_286253480.1 | DUF2235 domain-containing protein | - |
| QUE75_RS02795 (MAALD49_05530) | - | 612355..612960 (+) | 606 | WP_318036579.1 | DUF2931 family protein | - |
| QUE75_RS02800 (MAALD49_05540) | - | 612979..615420 (-) | 2442 | WP_286253482.1 | EAL domain-containing protein | - |
| QUE75_RS02805 (MAALD49_05550) | - | 615560..618409 (+) | 2850 | WP_286253483.1 | class I adenylate cyclase | - |
| QUE75_RS02810 (MAALD49_05560) | - | 618482..618652 (+) | 171 | WP_138436827.1 | LPS translocon maturation chaperone LptM | - |
| QUE75_RS02815 (MAALD49_05570) | lysA | 618697..619947 (+) | 1251 | WP_106694427.1 | diaminopimelate decarboxylase | - |
| QUE75_RS02820 (MAALD49_05580) | dapF | 619962..620876 (+) | 915 | WP_106694528.1 | diaminopimelate epimerase | - |
| QUE75_RS02825 (MAALD49_05590) | - | 620894..621646 (+) | 753 | WP_061332525.1 | DUF484 family protein | - |
| QUE75_RS02830 (MAALD49_05600) | xerC | 621682..622614 (+) | 933 | WP_106694529.1 | tyrosine recombinase XerC | - |
| QUE75_RS02835 (MAALD49_05610) | - | 622626..624020 (+) | 1395 | WP_072678636.1 | GGDEF domain-containing protein | - |
| QUE75_RS02840 (MAALD49_05620) | - | 624030..624263 (-) | 234 | WP_286253492.1 | DUF2789 domain-containing protein | - |
| QUE75_RS02845 (MAALD49_05630) | - | 624361..627117 (+) | 2757 | WP_286253493.1 | ATP-binding protein | - |
| QUE75_RS02850 (MAALD49_05640) | - | 627120..627485 (-) | 366 | WP_061332529.1 | hypothetical protein | - |
| QUE75_RS02855 (MAALD49_05650) | - | 627717..628325 (+) | 609 | WP_286253496.1 | hypothetical protein | - |
| QUE75_RS02860 (MAALD49_05660) | - | 628465..630543 (+) | 2079 | WP_286255587.1 | patatin-like phospholipase family protein | - |
| QUE75_RS02865 (MAALD49_05670) | - | 630564..631226 (-) | 663 | WP_286253498.1 | GntR family transcriptional regulator | - |
| QUE75_RS02870 (MAALD49_05680) | cls | 631304..632740 (-) | 1437 | WP_286253500.1 | cardiolipin synthase | - |
| QUE75_RS02875 (MAALD49_05690) | - | 632737..633777 (-) | 1041 | WP_286253501.1 | AraC family transcriptional regulator | - |
| QUE75_RS02880 (MAALD49_05700) | - | 634165..634956 (+) | 792 | WP_286253503.1 | alpha/beta fold hydrolase | - |
| QUE75_RS02885 (MAALD49_05710) | - | 635059..636144 (+) | 1086 | WP_286255589.1 | SMP-30/gluconolactonase/LRE family protein | - |
| QUE75_RS02890 (MAALD49_05720) | - | 636141..636605 (+) | 465 | WP_072678627.1 | thioesterase family protein | - |
| QUE75_RS02895 (MAALD49_05730) | - | 636683..637663 (+) | 981 | WP_286253507.1 | NADP-dependent oxidoreductase | - |
| QUE75_RS02900 (MAALD49_05740) | tcdA | 637660..638457 (-) | 798 | WP_106694438.1 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| QUE75_RS02905 (MAALD49_05750) | - | 638715..640490 (-) | 1776 | WP_106694439.1 | acyl-CoA dehydrogenase C-terminal domain-containing protein | - |
| QUE75_RS02910 (MAALD49_05760) | - | 640667..641401 (+) | 735 | WP_286253511.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| QUE75_RS02915 (MAALD49_05770) | - | 641420..642364 (-) | 945 | WP_286253513.1 | sodium-dependent bicarbonate transport family permease | - |
| QUE75_RS02920 (MAALD49_05780) | - | 642539..643177 (-) | 639 | WP_286253515.1 | ChrR family anti-sigma-E factor | - |
| QUE75_RS02925 (MAALD49_05790) | - | 643174..643773 (-) | 600 | WP_061332542.1 | sigma-70 family RNA polymerase sigma factor | - |
| QUE75_RS02930 (MAALD49_05800) | - | 644001..645047 (+) | 1047 | WP_286253517.1 | AraC family transcriptional regulator | - |
| QUE75_RS02935 (MAALD49_05810) | speA | 645051..646961 (-) | 1911 | WP_286253519.1 | biosynthetic arginine decarboxylase | - |
| QUE75_RS02940 (MAALD49_05820) | speE | 647191..648072 (+) | 882 | WP_061332546.1 | polyamine aminopropyltransferase | - |
| QUE75_RS02945 (MAALD49_05830) | - | 648165..648359 (+) | 195 | WP_061332547.1 | DUF6316 family protein | - |
| QUE75_RS02950 (MAALD49_05840) | - | 648436..649683 (-) | 1248 | WP_061332548.1 | ammonium transporter | - |
| QUE75_RS02955 (MAALD49_05850) | glnK | 649755..650093 (-) | 339 | WP_058091350.1 | P-II family nitrogen regulator | - |
| QUE75_RS02960 (MAALD49_05860) | - | 650478..650729 (+) | 252 | WP_061332549.1 | accessory factor UbiK family protein | - |
| QUE75_RS02965 (MAALD49_05870) | comM | 650803..652329 (+) | 1527 | WP_106694444.1 | YifB family Mg chelatase-like AAA ATPase | Machinery gene |
Sequence
Protein
Download Length: 508 a.a. Molecular weight: 53541.40 Da Isoelectric Point: 7.8410
>NTDB_id=103454 QUE75_RS02965 WP_106694444.1 650803..652329(+) (comM) [Marinobacter shengliensis strain D49]
MLAIVHSRASIGVSAPAVTVEVHLSGGLPALSIVGLPETGVRESKDRVRSALINAGFEFPARRITINLAPADLPKEGGRF
DLPIALGILAASGQIPAESLKDLEFIGELSLDGALRPLKGVLPAVLAARGAGRALLLPQDNAEEAALASDDDVFAASHIL
TVCEHLSGRARISPVARAQPEAGPRDEGLDLADVRGQQVPRRALEVAAAGGHNLLLFGPPGTGKSMLASRLPGILPALDD
AAAMEVASVHSVAGLPLKPGGWRQAPFRSPHHTASAVALVGGGSSPRPGEISLAHRGVLFLDELPEFQRRVLEVLREPME
TGEISISRAARQVTFPARFQVVAAMNPCPCGYSGHPTMECQCTPQQVMRYRSRISGPLLDRFDLHVEVPVQAGGVLLGAG
ETGESSASVRERVLRARARQSERGVLNAALAGKALHEASHLNAESEKLLSGAMEKLGLSARALHRILRVARTLADLDGQP
AVTRNYLMEALGYRQLDRQQGQSSVVSA
MLAIVHSRASIGVSAPAVTVEVHLSGGLPALSIVGLPETGVRESKDRVRSALINAGFEFPARRITINLAPADLPKEGGRF
DLPIALGILAASGQIPAESLKDLEFIGELSLDGALRPLKGVLPAVLAARGAGRALLLPQDNAEEAALASDDDVFAASHIL
TVCEHLSGRARISPVARAQPEAGPRDEGLDLADVRGQQVPRRALEVAAAGGHNLLLFGPPGTGKSMLASRLPGILPALDD
AAAMEVASVHSVAGLPLKPGGWRQAPFRSPHHTASAVALVGGGSSPRPGEISLAHRGVLFLDELPEFQRRVLEVLREPME
TGEISISRAARQVTFPARFQVVAAMNPCPCGYSGHPTMECQCTPQQVMRYRSRISGPLLDRFDLHVEVPVQAGGVLLGAG
ETGESSASVRERVLRARARQSERGVLNAALAGKALHEASHLNAESEKLLSGAMEKLGLSARALHRILRVARTLADLDGQP
AVTRNYLMEALGYRQLDRQQGQSSVVSA
Nucleotide
Download Length: 1527 bp
>NTDB_id=103454 QUE75_RS02965 WP_106694444.1 650803..652329(+) (comM) [Marinobacter shengliensis strain D49]
ATGCTTGCTATTGTCCATTCCCGTGCCAGTATCGGTGTGTCTGCACCGGCAGTGACTGTTGAAGTGCATCTGTCTGGCGG
ACTGCCGGCCCTGTCGATTGTTGGATTGCCGGAAACCGGTGTGCGTGAGAGCAAAGACCGGGTTCGCAGTGCCTTGATCA
ACGCCGGGTTCGAATTCCCCGCCCGTCGAATCACCATTAACCTGGCCCCCGCAGACCTGCCCAAAGAGGGTGGACGCTTC
GACCTGCCCATCGCCCTTGGCATCCTCGCCGCTTCCGGGCAGATTCCCGCCGAAAGTCTCAAAGACCTCGAGTTCATTGG
CGAGTTGTCCCTGGATGGCGCATTACGGCCCCTGAAAGGCGTATTGCCGGCGGTACTGGCGGCAAGAGGCGCCGGTCGCG
CGCTGTTGCTTCCCCAAGACAATGCTGAAGAGGCCGCGCTGGCCAGCGATGATGACGTGTTTGCCGCCAGCCACATACTG
ACCGTCTGTGAGCATTTGTCTGGTCGCGCCCGGATATCCCCGGTAGCTCGAGCCCAGCCAGAAGCCGGGCCCCGGGACGA
GGGGCTGGACCTCGCGGACGTCCGGGGCCAGCAGGTTCCCCGACGGGCCCTGGAAGTGGCGGCTGCCGGCGGGCACAATC
TTCTGCTGTTTGGCCCGCCAGGCACCGGCAAAAGCATGCTGGCCAGCCGGCTGCCCGGCATACTGCCAGCCCTGGACGAC
GCCGCGGCTATGGAGGTGGCCAGTGTGCATTCAGTCGCCGGCCTTCCCCTCAAGCCCGGTGGTTGGCGGCAGGCTCCATT
CCGCTCCCCGCACCATACCGCTTCGGCGGTGGCGCTGGTGGGAGGTGGTAGCAGCCCAAGGCCCGGAGAAATCTCCCTGG
CCCATCGAGGCGTACTGTTTCTTGACGAGTTGCCAGAGTTCCAGCGCCGCGTGTTGGAGGTATTGCGGGAACCTATGGAA
ACCGGTGAAATTTCCATCAGTCGGGCTGCACGGCAGGTCACTTTTCCTGCCCGATTCCAGGTGGTTGCTGCTATGAACCC
TTGCCCGTGCGGCTACAGTGGGCATCCGACCATGGAGTGTCAGTGTACGCCGCAGCAGGTCATGCGCTATCGCTCCCGGA
TATCCGGGCCGTTGCTGGACCGGTTTGACCTGCACGTTGAAGTGCCGGTGCAGGCCGGGGGCGTGTTGTTGGGGGCGGGT
GAAACCGGAGAGTCCAGCGCCAGCGTCCGGGAACGGGTGCTACGGGCCCGGGCCAGGCAGTCAGAACGGGGCGTGCTCAA
TGCGGCCCTTGCTGGCAAGGCGTTGCACGAGGCCAGCCATCTGAATGCGGAGAGCGAGAAACTGCTGTCCGGAGCCATGG
AGAAACTTGGGTTGTCTGCGCGGGCGTTGCATCGGATTCTGCGAGTGGCCCGCACCCTGGCGGACCTGGATGGCCAGCCA
GCGGTAACCCGAAACTATCTGATGGAAGCGCTCGGCTACCGGCAACTGGACCGTCAACAGGGGCAAAGCTCGGTTGTCTC
CGCTTGA
ATGCTTGCTATTGTCCATTCCCGTGCCAGTATCGGTGTGTCTGCACCGGCAGTGACTGTTGAAGTGCATCTGTCTGGCGG
ACTGCCGGCCCTGTCGATTGTTGGATTGCCGGAAACCGGTGTGCGTGAGAGCAAAGACCGGGTTCGCAGTGCCTTGATCA
ACGCCGGGTTCGAATTCCCCGCCCGTCGAATCACCATTAACCTGGCCCCCGCAGACCTGCCCAAAGAGGGTGGACGCTTC
GACCTGCCCATCGCCCTTGGCATCCTCGCCGCTTCCGGGCAGATTCCCGCCGAAAGTCTCAAAGACCTCGAGTTCATTGG
CGAGTTGTCCCTGGATGGCGCATTACGGCCCCTGAAAGGCGTATTGCCGGCGGTACTGGCGGCAAGAGGCGCCGGTCGCG
CGCTGTTGCTTCCCCAAGACAATGCTGAAGAGGCCGCGCTGGCCAGCGATGATGACGTGTTTGCCGCCAGCCACATACTG
ACCGTCTGTGAGCATTTGTCTGGTCGCGCCCGGATATCCCCGGTAGCTCGAGCCCAGCCAGAAGCCGGGCCCCGGGACGA
GGGGCTGGACCTCGCGGACGTCCGGGGCCAGCAGGTTCCCCGACGGGCCCTGGAAGTGGCGGCTGCCGGCGGGCACAATC
TTCTGCTGTTTGGCCCGCCAGGCACCGGCAAAAGCATGCTGGCCAGCCGGCTGCCCGGCATACTGCCAGCCCTGGACGAC
GCCGCGGCTATGGAGGTGGCCAGTGTGCATTCAGTCGCCGGCCTTCCCCTCAAGCCCGGTGGTTGGCGGCAGGCTCCATT
CCGCTCCCCGCACCATACCGCTTCGGCGGTGGCGCTGGTGGGAGGTGGTAGCAGCCCAAGGCCCGGAGAAATCTCCCTGG
CCCATCGAGGCGTACTGTTTCTTGACGAGTTGCCAGAGTTCCAGCGCCGCGTGTTGGAGGTATTGCGGGAACCTATGGAA
ACCGGTGAAATTTCCATCAGTCGGGCTGCACGGCAGGTCACTTTTCCTGCCCGATTCCAGGTGGTTGCTGCTATGAACCC
TTGCCCGTGCGGCTACAGTGGGCATCCGACCATGGAGTGTCAGTGTACGCCGCAGCAGGTCATGCGCTATCGCTCCCGGA
TATCCGGGCCGTTGCTGGACCGGTTTGACCTGCACGTTGAAGTGCCGGTGCAGGCCGGGGGCGTGTTGTTGGGGGCGGGT
GAAACCGGAGAGTCCAGCGCCAGCGTCCGGGAACGGGTGCTACGGGCCCGGGCCAGGCAGTCAGAACGGGGCGTGCTCAA
TGCGGCCCTTGCTGGCAAGGCGTTGCACGAGGCCAGCCATCTGAATGCGGAGAGCGAGAAACTGCTGTCCGGAGCCATGG
AGAAACTTGGGTTGTCTGCGCGGGCGTTGCATCGGATTCTGCGAGTGGCCCGCACCCTGGCGGACCTGGATGGCCAGCCA
GCGGTAACCCGAAACTATCTGATGGAAGCGCTCGGCTACCGGCAACTGGACCGTCAACAGGGGCAAAGCTCGGTTGTCTC
CGCTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comM | Haemophilus influenzae Rd KW20 |
55.777 |
98.819 |
0.551 |
| comM | Glaesserella parasuis strain SC1401 |
55.777 |
98.819 |
0.551 |
| comM | Vibrio cholerae strain A1552 |
55.422 |
98.031 |
0.543 |
| comM | Vibrio campbellii strain DS40M4 |
54.819 |
98.031 |
0.537 |
| comM | Legionella pneumophila str. Paris |
49.597 |
97.638 |
0.484 |
| comM | Legionella pneumophila strain ERS1305867 |
49.597 |
97.638 |
0.484 |
| RA0C_RS07335 | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
47.151 |
100 |
0.472 |