Detailed information
Overview
| Name | comM | Type | Machinery gene |
| Locus tag | AB8Z76_RS20090 | Genome accession | NZ_CP166098 |
| Coordinates | 4588992..4590512 (+) | Length | 506 a.a. |
| NCBI ID | WP_039568535.1 | Uniprot ID | A0AB34QKL8 |
| Organism | Xanthomonas phaseoli pv. phaseoli strain NCPPB 3035 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4583992..4595512
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB8Z76_RS20070 (AB8Z76_20060) | - | 4584838..4585494 (+) | 657 | WP_039573547.1 | RIO1 family regulatory kinase/ATPase | - |
| AB8Z76_RS20075 (AB8Z76_20065) | - | 4585701..4587686 (-) | 1986 | WP_039573544.1 | beta-N-acetylglucosaminidase domain-containing protein | - |
| AB8Z76_RS20080 (AB8Z76_20070) | - | 4588170..4588544 (-) | 375 | WP_008574841.1 | P-II family nitrogen regulator | - |
| AB8Z76_RS20085 (AB8Z76_20075) | - | 4588698..4588976 (+) | 279 | WP_017156738.1 | accessory factor UbiK family protein | - |
| AB8Z76_RS20090 (AB8Z76_20080) | comM | 4588992..4590512 (+) | 1521 | WP_039568535.1 | YifB family Mg chelatase-like AAA ATPase | Machinery gene |
| AB8Z76_RS20095 (AB8Z76_20085) | - | 4590851..4591348 (+) | 498 | WP_039568534.1 | lipocalin family protein | - |
| AB8Z76_RS20100 (AB8Z76_20090) | - | 4591576..4591752 (-) | 177 | WP_017158194.1 | hypothetical protein | - |
| AB8Z76_RS20105 (AB8Z76_20095) | - | 4592131..4593693 (+) | 1563 | WP_039568533.1 | EAL domain-containing protein | - |
| AB8Z76_RS20110 (AB8Z76_20100) | - | 4593758..4594879 (-) | 1122 | WP_017158196.1 | acyl-CoA desaturase | - |
Sequence
Protein
Download Length: 506 a.a. Molecular weight: 53973.70 Da Isoelectric Point: 8.5251
>NTDB_id=1033408 AB8Z76_RS20090 WP_039568535.1 4588992..4590512(+) (comM) [Xanthomonas phaseoli pv. phaseoli strain NCPPB 3035]
MSLALVHSRARVGVHAPEVRVEVHLSGGLPSTQIVGLPEAAVRESRERVRAALLCAQFEFPARRITINLAPADLPKEGGR
FDLPIALGILAASGQIDRQALADYEFLGELALTGELRGVDGVLPAALAAAQAGRRLIVPLANGAEAAIAGHVEAFTARTL
LDVCATLNGSQKAPAAELAVQALGARALPDMADVRGQPHARRALEIAAAGGHHLLLVGSPGCGKTLLASRLPGLLPEASE
AEALETAAITSISGRGLDLARWRQRPYRAPHHTASPVALVGGGTHPRPGEISLSHNGVLFLDELPEWQRQTLEVLREPLE
SGVVTIARASRSVDFPARFQLIAAMNPCPCGWAGDGSGRCRCSSDSIRRYRSRISGPLLDRIDLHVEVPRLPPQALRSGN
LGENSASVRTRVVAARQRQLARGALPNAQLDQADTDRHCRLQHDDQVLLERAIEHLQLSARSMHRILRVARTIADLDDSP
DIATRHLTEAIGYRKLDRALGAASAA
MSLALVHSRARVGVHAPEVRVEVHLSGGLPSTQIVGLPEAAVRESRERVRAALLCAQFEFPARRITINLAPADLPKEGGR
FDLPIALGILAASGQIDRQALADYEFLGELALTGELRGVDGVLPAALAAAQAGRRLIVPLANGAEAAIAGHVEAFTARTL
LDVCATLNGSQKAPAAELAVQALGARALPDMADVRGQPHARRALEIAAAGGHHLLLVGSPGCGKTLLASRLPGLLPEASE
AEALETAAITSISGRGLDLARWRQRPYRAPHHTASPVALVGGGTHPRPGEISLSHNGVLFLDELPEWQRQTLEVLREPLE
SGVVTIARASRSVDFPARFQLIAAMNPCPCGWAGDGSGRCRCSSDSIRRYRSRISGPLLDRIDLHVEVPRLPPQALRSGN
LGENSASVRTRVVAARQRQLARGALPNAQLDQADTDRHCRLQHDDQVLLERAIEHLQLSARSMHRILRVARTIADLDDSP
DIATRHLTEAIGYRKLDRALGAASAA
Nucleotide
Download Length: 1521 bp
>NTDB_id=1033408 AB8Z76_RS20090 WP_039568535.1 4588992..4590512(+) (comM) [Xanthomonas phaseoli pv. phaseoli strain NCPPB 3035]
ATGAGTCTGGCGCTGGTGCACAGCCGTGCCCGCGTGGGGGTGCATGCGCCTGAAGTTCGGGTGGAAGTGCATCTCTCCGG
CGGTCTTCCCTCCACCCAGATCGTGGGCCTACCCGAAGCGGCAGTGCGCGAATCGCGCGAGCGCGTGCGTGCCGCCCTGC
TGTGCGCACAGTTCGAATTCCCCGCCCGGCGCATCACCATCAACCTGGCACCGGCCGATCTACCGAAAGAAGGCGGCCGG
TTCGACCTGCCGATCGCTCTCGGCATCCTGGCTGCCAGCGGGCAGATCGACCGCCAGGCCCTGGCCGATTACGAATTCCT
CGGCGAGCTTGCGCTGACCGGCGAGCTGCGCGGCGTCGACGGCGTGCTGCCCGCGGCATTGGCGGCCGCGCAGGCCGGGC
GTCGGCTGATCGTCCCGCTCGCCAACGGTGCCGAAGCCGCCATCGCCGGGCACGTCGAAGCCTTCACCGCGCGCACCCTG
CTGGATGTCTGCGCCACGCTCAACGGCAGCCAGAAAGCGCCTGCCGCCGAGCTGGCAGTGCAGGCGCTCGGCGCCCGCGC
CCTGCCCGACATGGCCGACGTACGCGGCCAACCGCACGCACGTCGCGCGCTGGAGATCGCCGCCGCCGGTGGGCATCATC
TATTGCTGGTCGGCAGCCCTGGCTGCGGCAAGACCCTGCTGGCCTCGCGCCTGCCTGGTCTATTGCCCGAGGCCAGCGAA
GCAGAGGCACTGGAAACCGCAGCGATCACCTCGATCAGCGGCCGTGGGCTGGATCTGGCCCGCTGGCGGCAACGCCCCTA
CCGCGCCCCGCACCACACCGCCAGCCCAGTGGCCCTGGTCGGCGGCGGCACGCACCCGCGCCCCGGCGAGATCTCGCTGT
CTCACAACGGCGTGCTGTTCCTGGACGAATTGCCCGAGTGGCAACGGCAAACCTTGGAAGTGTTGCGCGAGCCACTGGAG
TCGGGCGTGGTCACGATCGCGCGCGCGTCACGCAGCGTGGATTTTCCGGCGCGCTTCCAACTAATCGCCGCCATGAATCC
CTGCCCGTGCGGCTGGGCAGGCGATGGCAGCGGGCGCTGCCGCTGCAGCAGCGACAGCATCCGTCGCTACCGCAGCCGCA
TCTCGGGCCCGTTGCTGGACCGCATCGACCTGCATGTGGAAGTGCCGCGCCTTCCGCCTCAGGCGCTGCGCAGCGGCAAC
CTTGGTGAAAACAGCGCCAGCGTGCGGACGCGCGTGGTCGCCGCACGACAACGACAGCTTGCACGCGGCGCGCTGCCCAA
TGCGCAACTGGACCAGGCCGACACCGACCGCCATTGCCGCCTGCAACACGACGATCAGGTGCTGCTGGAGCGCGCCATCG
AACACCTGCAGCTGTCCGCACGCTCGATGCATCGCATCCTGCGCGTTGCACGCACCATCGCCGATCTCGACGACAGCCCG
GACATCGCCACACGCCATCTCACCGAAGCGATCGGCTACCGCAAACTGGATCGTGCGCTTGGCGCCGCCAGCGCGGCGTA
G
ATGAGTCTGGCGCTGGTGCACAGCCGTGCCCGCGTGGGGGTGCATGCGCCTGAAGTTCGGGTGGAAGTGCATCTCTCCGG
CGGTCTTCCCTCCACCCAGATCGTGGGCCTACCCGAAGCGGCAGTGCGCGAATCGCGCGAGCGCGTGCGTGCCGCCCTGC
TGTGCGCACAGTTCGAATTCCCCGCCCGGCGCATCACCATCAACCTGGCACCGGCCGATCTACCGAAAGAAGGCGGCCGG
TTCGACCTGCCGATCGCTCTCGGCATCCTGGCTGCCAGCGGGCAGATCGACCGCCAGGCCCTGGCCGATTACGAATTCCT
CGGCGAGCTTGCGCTGACCGGCGAGCTGCGCGGCGTCGACGGCGTGCTGCCCGCGGCATTGGCGGCCGCGCAGGCCGGGC
GTCGGCTGATCGTCCCGCTCGCCAACGGTGCCGAAGCCGCCATCGCCGGGCACGTCGAAGCCTTCACCGCGCGCACCCTG
CTGGATGTCTGCGCCACGCTCAACGGCAGCCAGAAAGCGCCTGCCGCCGAGCTGGCAGTGCAGGCGCTCGGCGCCCGCGC
CCTGCCCGACATGGCCGACGTACGCGGCCAACCGCACGCACGTCGCGCGCTGGAGATCGCCGCCGCCGGTGGGCATCATC
TATTGCTGGTCGGCAGCCCTGGCTGCGGCAAGACCCTGCTGGCCTCGCGCCTGCCTGGTCTATTGCCCGAGGCCAGCGAA
GCAGAGGCACTGGAAACCGCAGCGATCACCTCGATCAGCGGCCGTGGGCTGGATCTGGCCCGCTGGCGGCAACGCCCCTA
CCGCGCCCCGCACCACACCGCCAGCCCAGTGGCCCTGGTCGGCGGCGGCACGCACCCGCGCCCCGGCGAGATCTCGCTGT
CTCACAACGGCGTGCTGTTCCTGGACGAATTGCCCGAGTGGCAACGGCAAACCTTGGAAGTGTTGCGCGAGCCACTGGAG
TCGGGCGTGGTCACGATCGCGCGCGCGTCACGCAGCGTGGATTTTCCGGCGCGCTTCCAACTAATCGCCGCCATGAATCC
CTGCCCGTGCGGCTGGGCAGGCGATGGCAGCGGGCGCTGCCGCTGCAGCAGCGACAGCATCCGTCGCTACCGCAGCCGCA
TCTCGGGCCCGTTGCTGGACCGCATCGACCTGCATGTGGAAGTGCCGCGCCTTCCGCCTCAGGCGCTGCGCAGCGGCAAC
CTTGGTGAAAACAGCGCCAGCGTGCGGACGCGCGTGGTCGCCGCACGACAACGACAGCTTGCACGCGGCGCGCTGCCCAA
TGCGCAACTGGACCAGGCCGACACCGACCGCCATTGCCGCCTGCAACACGACGATCAGGTGCTGCTGGAGCGCGCCATCG
AACACCTGCAGCTGTCCGCACGCTCGATGCATCGCATCCTGCGCGTTGCACGCACCATCGCCGATCTCGACGACAGCCCG
GACATCGCCACACGCCATCTCACCGAAGCGATCGGCTACCGCAAACTGGATCGTGCGCTTGGCGCCGCCAGCGCGGCGTA
G
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comM | Vibrio cholerae strain A1552 |
55.929 |
100 |
0.559 |
| comM | Haemophilus influenzae Rd KW20 |
54.99 |
100 |
0.555 |
| comM | Glaesserella parasuis strain SC1401 |
54.043 |
100 |
0.541 |
| comM | Vibrio campbellii strain DS40M4 |
53.755 |
100 |
0.538 |
| comM | Legionella pneumophila str. Paris |
51.71 |
98.221 |
0.508 |
| comM | Legionella pneumophila strain ERS1305867 |
51.71 |
98.221 |
0.508 |
| RA0C_RS07335 | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
45.079 |
100 |
0.453 |