Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   AB6M97_RS10070 Genome accession   NZ_CP163514
Coordinates   2045503..2046555 (-) Length   350 a.a.
NCBI ID   WP_121836456.1    Uniprot ID   A0A3L9DJW6
Organism   Streptococcus hillyeri strain S23-3001-1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 2040503..2051555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6M97_RS10050 (AB6M97_10050) - 2040536..2041087 (-) 552 WP_183121699.1 nucleotidyltransferase family protein -
  AB6M97_RS10055 (AB6M97_10055) tkt 2041135..2043108 (-) 1974 WP_121836458.1 transketolase -
  AB6M97_RS10060 (AB6M97_10060) - 2043245..2044405 (+) 1161 WP_121836465.1 ISAs1 family transposase -
  AB6M97_RS10065 (AB6M97_10065) amiF 2044570..2045493 (-) 924 WP_121836457.1 ATP-binding cassette domain-containing protein Regulator
  AB6M97_RS10070 (AB6M97_10070) amiE 2045503..2046555 (-) 1053 WP_121836456.1 ABC transporter ATP-binding protein Regulator
  AB6M97_RS10075 (AB6M97_10075) amiD 2046565..2047491 (-) 927 WP_121836455.1 oligopeptide ABC transporter permease OppC Regulator
  AB6M97_RS10080 (AB6M97_10080) amiC 2047491..2048993 (-) 1503 WP_121836454.1 ABC transporter permease Regulator
  AB6M97_RS10085 (AB6M97_10085) amiA 2049058..2051028 (-) 1971 WP_369350711.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 350 a.a.        Molecular weight: 38956.67 Da        Isoelectric Point: 5.2883

>NTDB_id=1030371 AB6M97_RS10070 WP_121836456.1 2045503..2046555(-) (amiE) [Streptococcus hillyeri strain S23-3001-1]
MTETKNVILSAEDVVVEFDVRDRVLTAIRSVSLELVEGEVLALVGESGSGKSVLTKTFTGMLESNGRVASGKITYRGQDL
TSINSHSDWEKIRGSKIATIFQDPMTSLNPIKTIGAQISEVIIKHQGVSKEEARELSIDYMNKVGIPNAEKRFNDYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQKEYNFTTIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEDIFYDPRHPYTWSLLSSLPQLATESGELFSIPGTPPSLYAPIKGDAFALRSEYAMQIDFEEPAPKFKVSDHHWAK
TWLLHPEAPKVEKPEVIQNLHEKISRKMLK

Nucleotide


Download         Length: 1053 bp        

>NTDB_id=1030371 AB6M97_RS10070 WP_121836456.1 2045503..2046555(-) (amiE) [Streptococcus hillyeri strain S23-3001-1]
ATGACAGAAACTAAAAATGTAATTTTATCAGCCGAAGATGTGGTCGTGGAATTTGATGTCCGTGACCGTGTTTTGACAGC
AATCCGTAGTGTATCTTTAGAGCTTGTAGAAGGTGAAGTTCTCGCTCTTGTTGGTGAATCAGGTTCGGGGAAATCTGTTT
TAACGAAAACTTTTACAGGTATGCTAGAGTCAAATGGTCGTGTTGCTTCTGGAAAAATCACTTATCGTGGTCAAGATTTA
ACAAGTATTAATTCACATTCGGACTGGGAAAAAATTCGTGGTTCAAAAATTGCGACGATTTTCCAAGATCCAATGACCAG
TCTTAATCCGATTAAAACAATCGGTGCTCAAATTTCAGAAGTCATCATCAAGCATCAAGGAGTTTCGAAAGAAGAAGCTC
GCGAACTCTCCATAGACTACATGAATAAAGTTGGTATCCCAAATGCGGAAAAACGTTTCAATGATTATCCGTTCCAGTAT
TCAGGAGGGATGCGTCAACGTATCGTTATCGCAATTGCTCTTGCCTGTCGTCCAGATGTGCTTATCTGTGATGAACCGAC
AACGGCTCTTGATGTGACGATTCAGGCTCAAATTATTGATCTTTTGAAGTCTCTTCAAAAAGAATATAATTTCACAACTA
TCTTTATCACGCATGACCTCGGTGTCGTTGCCTCTATCGCTGACAAGGTTGCGGTAATGTATGCTGGTGAAATTGTTGAG
TTTGGTACAGTTGAAGATATTTTTTATGACCCACGTCATCCTTATACATGGAGCCTTTTATCTTCGCTACCTCAGTTGGC
AACAGAGTCTGGTGAGTTATTCTCTATCCCGGGAACTCCTCCGTCACTCTACGCGCCTATAAAAGGAGATGCATTTGCTC
TTCGTTCTGAATATGCAATGCAGATTGACTTTGAAGAACCGGCACCTAAATTTAAAGTTTCGGATCACCACTGGGCTAAA
ACTTGGTTGCTCCATCCAGAGGCTCCCAAAGTTGAAAAACCAGAAGTTATCCAAAATCTTCATGAGAAAATTTCTCGTAA
AATGTTGAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3L9DJW6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

83.621

99.429

0.831

  amiE Streptococcus thermophilus LMG 18311

82.471

99.429

0.82

  amiE Streptococcus thermophilus LMD-9

82.471

99.429

0.82

  oppD Streptococcus mutans UA159

56.765

97.143

0.551


Multiple sequence alignment