Detailed information NTG1024860

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABW635_RS04725
• Genome accession: NZ_CP162310
• Coordinates: 966699..967544 (+)
• Length: 281 a.a.
• NCBI ID: WP_003099573.1
• Uniprot ID: A0A1J0MYY1
• Organism: Streptococcus iniae strain ZQ2205
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 961699..972544

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABW635_RS04700 (ABW635_04700)	-	961857..963143 (+)	1287	WP_003099561.1	PTS sugar transporter subunit IIC	-
ABW635_RS04705 (ABW635_04705)	-	963140..963979 (+)	840	WP_003099563.1	alpha/beta hydrolase	-
ABW635_RS04710 (ABW635_04710)	ylqF	964449..965303 (+)	855	WP_003099566.1	ribosome biogenesis GTPase YlqF	-
ABW635_RS04715 (ABW635_04715)	-	965287..966072 (+)	786	WP_003099568.1	ribonuclease HII	-
ABW635_RS04720 (ABW635_04720)	-	966085..966633 (+)	549	WP_003099570.1	sugar O-acetyltransferase	-
ABW635_RS04725 (ABW635_04725)	dprA	966699..967544 (+)	846	WP_003099573.1	DNA-processing protein DprA	Machinery gene
ABW635_RS04730 (ABW635_04730)	topA	967641..969776 (+)	2136	WP_003099575.1	type I DNA topoisomerase	-
ABW635_RS04735 (ABW635_04735)	-	969870..970754 (-)	885	WP_003099578.1	LysR family transcriptional regulator	-
ABW635_RS04740 (ABW635_04740)	-	970920..971978 (+)	1059	WP_003099589.1	PTS transporter subunit IIC	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31550.74 Da
• Isoelectric Point: 9.9826

>NTDB_id=1024860 ABW635_RS04725 WP_003099573.1 966699..967544(+) (dprA) [Streptococcus iniae strain ZQ2205]
MNNFELYKLKKAGLKNHHILNIIHYSQQTKKSLSLRNMAVVSGTSKPCLFLENYKLLNIKELRVEFKKYPSFSILDKTYP
LALKEIDNPPVLLFYQGNLELLNRHKLAVVGSRKSSAVGNKSVESLIKQLNNQFVIVSGLARGIDTVAHFSSIKQGGETI
AVIGSGLDIYYPKENRRLQEFIAEKHLLLSEYCPKEAPLAHHFPERNRIIAGLSMGVLVAEAKWRSGSLITCRFALDYGR
DIFVVPGAILDKQSQGGNHLIQEGAKLVTKGLDIISEYQFL

Nucleotide

• Length: 846 bp

>NTDB_id=1024860 ABW635_RS04725 WP_003099573.1 966699..967544(+) (dprA) [Streptococcus iniae strain ZQ2205]
ATGAATAACTTTGAACTGTATAAATTAAAGAAAGCTGGCCTAAAAAATCATCATATTCTAAATATCATTCATTATAGCCA
GCAAACTAAGAAATCTCTATCACTTAGAAATATGGCTGTTGTTTCAGGAACAAGTAAACCATGTCTGTTTTTAGAAAATT
ACAAGCTGTTAAATATAAAAGAGTTACGAGTAGAATTTAAGAAGTATCCCAGCTTTTCAATTTTAGACAAGACCTATCCC
CTTGCTTTAAAAGAAATTGATAATCCGCCAGTATTATTATTTTATCAAGGAAATTTAGAGCTTTTAAATCGGCATAAATT
AGCAGTGGTAGGGTCAAGGAAATCCTCAGCAGTTGGAAACAAATCTGTTGAATCTCTCATCAAGCAACTTAATAATCAGT
TTGTTATTGTTAGTGGGTTGGCTAGAGGAATTGATACTGTAGCTCATTTTTCGAGCATCAAACAAGGTGGAGAGACTATT
GCTGTTATTGGATCAGGGTTAGACATTTATTATCCTAAGGAAAATAGAAGATTACAGGAGTTTATTGCTGAAAAGCATTT
ATTATTAAGTGAATATTGCCCTAAGGAAGCACCTTTAGCACATCATTTTCCAGAACGAAATCGCATAATTGCAGGCTTAT
CTATGGGAGTTTTAGTGGCAGAAGCCAAATGGCGTTCTGGTAGTCTAATCACTTGTCGCTTTGCACTTGATTACGGTAGG
GATATTTTTGTTGTTCCAGGCGCCATCCTTGACAAACAGTCGCAGGGAGGGAATCACCTCATTCAAGAGGGAGCGAAGCT
TGTTACAAAAGGACTTGACATCATTTCTGAATACCAATTTTTATAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

3D structure

• AlphaFold DB: A0A1J0MYY1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	66.786	99.644	0.665
dprA/cilB/dalA	Streptococcus mitis SK321	57.5	99.644	0.573
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae D39	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae R6	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	56.786	99.644	0.566
dprA	Lactococcus lactis subsp. cremoris KW2	54.643	99.644	0.544