Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   AB1F57_RS11655 Genome accession   NZ_CP162268
Coordinates   2294325..2295032 (-) Length   235 a.a.
NCBI ID   WP_167785190.1    Uniprot ID   -
Organism   Streptococcus sp. ZY1909104     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context


Location: 2289325..2300032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F57_RS11635 (AB1F57_11635) - 2290385..2290924 (-) 540 WP_167785193.1 GNAT family N-acetyltransferase -
  AB1F57_RS11640 (AB1F57_11640) sufD 2290926..2292188 (-) 1263 WP_167785192.1 Fe-S cluster assembly protein SufD -
  AB1F57_RS11645 (AB1F57_11645) sufC 2292205..2292978 (-) 774 WP_105111544.1 Fe-S cluster assembly ATPase SufC -
  AB1F57_RS11650 (AB1F57_11650) - 2293147..2294328 (-) 1182 WP_167785191.1 MraY family glycosyltransferase -
  AB1F57_RS11655 (AB1F57_11655) mecA 2294325..2295032 (-) 708 WP_167785190.1 adaptor protein MecA Regulator
  AB1F57_RS11660 (AB1F57_11660) - 2295151..2295987 (-) 837 WP_367985770.1 undecaprenyl-diphosphate phosphatase -
  AB1F57_RS11665 (AB1F57_11665) - 2296280..2297845 (+) 1566 WP_170239360.1 ABC transporter substrate-binding protein/permease -
  AB1F57_RS11670 (AB1F57_11670) - 2297838..2298578 (+) 741 WP_105111539.1 amino acid ABC transporter ATP-binding protein -
  AB1F57_RS11675 (AB1F57_11675) - 2298928..2299137 (-) 210 WP_024391394.1 hypothetical protein -

Sequence


Protein


Download         Length: 235 a.a.        Molecular weight: 27298.76 Da        Isoelectric Point: 4.0887

>NTDB_id=1024711 AB1F57_RS11655 WP_167785190.1 2294325..2295032(-) (mecA) [Streptococcus sp. ZY1909104]
MKVKQISDSTLKITILLDDLEERGMEIADFLMPHEKTEEFFYSVLDELELPLTFRESGMLSFRVTPKPDKVDIFVTKSEI
DKHINFEDLADFDNLDEVSQMTPADFLQSLEKNLKDKSAYDKDAVRRLADIEAEEEAEPYIYYVLHFDHLHEVVQFAQAI
DVDFEESELYKMNDDYFMTVLLDVSNRSADYPDYLLSRMLEYTDDSTVTRPVLQEHGQVLLSLAAVEELKKVSLA

Nucleotide


Download         Length: 708 bp        

>NTDB_id=1024711 AB1F57_RS11655 WP_167785190.1 2294325..2295032(-) (mecA) [Streptococcus sp. ZY1909104]
ATGAAAGTAAAACAAATTAGTGATTCGACCTTGAAAATCACTATTCTATTAGATGATTTGGAAGAAAGAGGCATGGAGAT
TGCGGATTTTCTTATGCCTCATGAGAAGACGGAGGAATTCTTTTATTCTGTTTTAGATGAATTGGAGTTGCCCCTGACAT
TTCGAGAAAGTGGCATGCTCAGTTTTCGCGTAACGCCCAAGCCTGACAAGGTCGATATTTTTGTAACCAAGTCAGAGATT
GATAAGCACATCAACTTTGAGGACTTGGCTGACTTTGACAATCTCGATGAGGTCAGTCAGATGACGCCGGCGGATTTTCT
TCAGTCTTTGGAGAAAAACCTGAAAGATAAGAGCGCCTATGACAAGGATGCGGTACGGCGTCTGGCAGATATAGAGGCTG
AAGAAGAGGCAGAACCCTATATCTACTACGTTCTGCACTTTGATCATTTGCACGAAGTGGTTCAATTCGCCCAGGCCATC
GATGTGGATTTTGAAGAATCAGAGCTCTACAAGATGAACGATGACTACTTTATGACTGTCCTCTTGGATGTGAGTAACCG
TTCCGCAGATTATCCAGATTACCTCCTGTCTAGAATGTTGGAGTACACGGACGACTCTACCGTGACCCGTCCTGTTCTGC
AGGAGCATGGCCAGGTCTTGTTGTCTCTGGCCGCTGTTGAGGAATTGAAGAAGGTAAGTCTTGCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

54.694

100

0.57

  mecA Streptococcus pneumoniae D39

54.694

100

0.57

  mecA Streptococcus pneumoniae R6

54.694

100

0.57

  mecA Streptococcus pneumoniae TIGR4

54.694

100

0.57

  mecA Streptococcus mutans UA159

48.571

100

0.506

  mecA Streptococcus thermophilus LMD-9

42.46

100

0.455

  mecA Streptococcus thermophilus LMG 18311

42.063

100

0.451


Multiple sequence alignment