Detailed information NTG1024011

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: DQM62_RS02080
• Genome accession: NZ_LS483418
• Coordinates: 401415..403805 (+)
• Length: 796 a.a.
• NCBI ID: WP_012774982.1
• Uniprot ID: A0A0H3MTL9
• Organism: Streptococcus suis strain NCTC10234
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 396415..408805

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM62_RS02060 (NCTC10234_00401)	-	397878..398360 (-)	483	WP_004194159.1	S-ribosylhomocysteine lyase	-
DQM62_RS02065 (NCTC10234_00402)	-	398490..400103 (+)	1614	WP_011921986.1	ribonuclease Y	-
DQM62_RS02070 (NCTC10234_00403)	gmk	400258..400884 (+)	627	WP_012774981.1	guanylate kinase	-
DQM62_RS02075 (NCTC10234_00404)	rpoZ	400908..401222 (+)	315	WP_004194153.1	DNA-directed RNA polymerase subunit omega	-
DQM62_RS02080 (NCTC10234_00405)	priA	401415..403805 (+)	2391	WP_012774982.1	primosomal protein N'	Machinery gene
DQM62_RS02085 (NCTC10234_00406)	fmt	403937..404875 (+)	939	WP_011921989.1	methionyl-tRNA formyltransferase	-
DQM62_RS02090 (NCTC10234_00407)	rsmB	404862..406175 (+)	1314	WP_011921990.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
DQM62_RS02095 (NCTC10234_00408)	-	406213..406950 (+)	738	WP_012774983.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
DQM62_RS02100 (NCTC10234_00409)	pknB	406950..408608 (+)	1659	Protein_356	Stk1 family PASTA domain-containing Ser/Thr kinase	-

Sequence

Protein

• Length: 796 a.a.
• Molecular weight: 91043.87 Da
• Isoelectric Point: 5.8787

>NTDB_id=1024011 DQM62_RS02080 WP_012774982.1 401415..403805(+) (priA) [Streptococcus suis strain NCTC10234]
MLAQIIVDVPLMQTDQAYSYRVPAELEEGLKVGVRVHVPFGKGNRLIQGIVVDLIDEDDENSLQDLKELAEVLDYSPVLN
QEQFWLADQMRKSVFSYKITLLKSMLPSLLNSTYDKLIRPGIGLEMAEQISLFGDKEQIRFSDLDVTEQGKIMRLAQSGK
ILVDYVAKDKKQIKTEKWYRVCLEKLREADISNRAKKRQQLREFLLEQSEDQLLSNLKSDYSADTLRYFQEKGYIEVWEE
EVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIGQESQTFLLQGVTGSGKTEVYLQVIDRVLKMGKTAIMLVPEISLT
PQMTNRFISRFGQQVAILHSGLSDGEKYDEWRKIEAGNAQVVVGARSAIFAPLTNLGVIIIDEEHEATYKQDSNPRYHAR
DVAKLRADYNRATLVLGSATPSLETRARASRGVYGRLTLNQRANPLARIPEVEVVDFRDYIGQQEASNFTPVLIEKIREK
LARKEQVVLMLNRRGYSSFVMCRDCGSVDQCPNCDISLTLHMDTKTMNCHYCGFQKGIPQTCPNCQSRSIRYYGTGTQKA
YDELQELLPEARILRMDVDTTKKKGAHEDLLERFGRGEADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERT
FQLLTQVAGRAGRADKEGEVLIQTYNPNHYAIAFAKEQDYEGFYRYEMDIRKNLGYPPYYFTVGLTFSHKSEEFVVKKAY
ETVAFLRQHLTDAIQILGPTPKPIARTHNLYHYQIILKYRHEDRLEEVLNQILDWTQERENQDLRLIIDNEPQNMM

Nucleotide

• Length: 2391 bp

>NTDB_id=1024011 DQM62_RS02080 WP_012774982.1 401415..403805(+) (priA) [Streptococcus suis strain NCTC10234]
ATGTTAGCACAGATTATTGTAGACGTCCCTTTGATGCAGACAGATCAAGCTTATTCCTATCGAGTTCCAGCTGAGTTGGA
AGAGGGGCTCAAGGTTGGCGTGCGTGTCCATGTACCCTTTGGTAAGGGAAATCGGCTGATTCAAGGGATTGTAGTTGATT
TGATTGATGAAGATGATGAAAATAGCTTACAAGACTTGAAAGAGCTTGCCGAGGTTTTGGACTATAGTCCTGTTCTCAAT
CAAGAGCAATTTTGGTTGGCGGACCAGATGAGAAAGTCGGTCTTCTCCTATAAAATTACTCTCTTAAAATCCATGCTACC
CAGCTTGCTCAATTCGACCTATGACAAATTGATCCGTCCAGGGATTGGTTTGGAAATGGCAGAGCAGATTAGTCTGTTTG
GTGATAAGGAGCAGATTCGTTTTTCTGACTTGGACGTGACAGAGCAAGGGAAAATCATGCGTCTGGCCCAGTCAGGAAAA
ATCTTGGTAGACTATGTGGCCAAGGATAAGAAGCAAATCAAGACAGAAAAATGGTACCGAGTTTGTCTGGAGAAATTACG
AGAAGCAGACATCAGCAATCGGGCTAAAAAACGGCAGCAGTTAAGGGAATTTCTTCTGGAACAGTCGGAAGACCAGCTCC
TTTCAAACCTAAAATCGGACTATTCAGCTGATACGCTCCGCTATTTCCAAGAAAAAGGCTATATAGAAGTCTGGGAAGAG
GAAGTGTCGCGGACTCAGGGTGTTTTTGATAAGGTAGAAAAAACGCAGGCCTTGGATTTGAATCCAGAGCAGGCCATTGC
GGTTCGGGAGATTGTAGCCTCTATCGGTCAGGAAAGTCAGACATTTCTACTGCAAGGAGTGACAGGTTCTGGGAAGACGG
AAGTCTATCTCCAGGTTATTGATAGGGTCTTGAAGATGGGGAAAACGGCTATTATGCTGGTGCCTGAAATTTCCTTGACC
CCTCAGATGACCAATCGTTTTATTTCTCGTTTTGGTCAGCAGGTCGCGATTCTTCACTCCGGTCTGTCTGATGGAGAGAA
GTATGATGAGTGGCGGAAGATTGAGGCGGGGAATGCCCAGGTGGTTGTCGGGGCCCGTTCGGCCATTTTTGCCCCTTTGA
CAAACTTGGGTGTTATCATCATTGATGAGGAGCATGAAGCGACCTACAAGCAGGACAGCAATCCACGCTACCATGCGCGT
GATGTGGCAAAGTTGCGGGCAGACTATAATCGAGCGACCCTGGTCTTGGGGTCTGCTACGCCGAGTCTTGAAACACGGGC
TCGGGCTAGTCGAGGAGTCTATGGAAGACTGACTCTTAACCAGAGGGCCAATCCCTTGGCTCGTATTCCAGAAGTGGAAG
TTGTGGATTTCCGTGATTATATCGGTCAGCAGGAGGCTAGTAATTTTACCCCTGTTCTGATTGAAAAGATAAGAGAAAAA
TTGGCTCGTAAGGAACAGGTCGTTCTTATGTTGAATAGGCGTGGTTATTCTTCTTTTGTCATGTGTCGTGATTGTGGGAG
TGTTGACCAGTGTCCCAATTGTGATATTTCCCTAACGCTTCACATGGATACAAAAACGATGAATTGCCATTATTGTGGTT
TTCAAAAGGGGATTCCTCAGACCTGTCCAAACTGTCAAAGTCGTTCTATTCGTTATTATGGGACGGGTACGCAAAAGGCC
TACGATGAATTGCAGGAGCTCTTGCCAGAAGCTAGAATTTTGCGTATGGATGTGGATACTACCAAGAAAAAAGGTGCTCA
TGAGGACTTGCTCGAACGGTTTGGTCGAGGCGAAGCGGATATTCTTCTGGGAACTCAGATGATTGCCAAGGGCTTGGATT
TTCCAAATGTGACCCTAGTTGGGGTGCTCAATGCGGATACGGCTCTGAATTTGCCTGATTTTCGGTCTTCTGAGCGGACC
TTCCAGTTGCTAACTCAGGTAGCTGGTCGGGCTGGTCGAGCTGATAAGGAAGGAGAGGTCCTGATCCAGACCTATAACCC
CAATCATTATGCCATTGCTTTTGCCAAAGAGCAGGACTATGAAGGTTTCTATCGTTATGAGATGGACATTCGGAAAAATC
TTGGCTATCCACCTTACTATTTTACGGTGGGTCTAACCTTTTCGCACAAGTCAGAAGAATTTGTCGTGAAAAAAGCCTAT
GAAACTGTAGCCTTTCTCCGTCAACACTTAACAGATGCAATTCAAATCTTGGGACCGACGCCCAAGCCTATTGCCAGAAC
TCATAATCTCTACCACTACCAGATCATCTTGAAATACCGGCATGAAGACCGTTTGGAAGAGGTATTGAATCAGATTTTGG
ATTGGACACAGGAGAGAGAAAATCAAGATTTGCGACTGATTATTGACAATGAACCGCAGAATATGATGTGA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (570-654)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (4-107)

• Type III restriction enzyme, res subunit (ResIII) (259-422)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (511-536)

• Primosomal protein N C-terminal domain (PriA_C) (698-792)

3D structure

• AlphaFold DB: A0A0H3MTL9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	47.831	100	0.485