Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | AB1395_RS00780 | Genome accession | NZ_CP161815 |
| Coordinates | 138914..139867 (+) | Length | 317 a.a. |
| NCBI ID | WP_218653896.1 | Uniprot ID | - |
| Organism | Streptococcus pluranimalium strain SS-15 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 133914..144867
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB1395_RS00740 (AB1395_00740) | - | 134767..135147 (+) | 381 | WP_218653889.1 | DUF1033 family protein | - |
| AB1395_RS00745 (AB1395_00745) | comYA | 135210..136163 (+) | 954 | WP_367783521.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB1395_RS00750 (AB1395_00750) | comYB | 136087..137115 (+) | 1029 | WP_367784195.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB1395_RS00755 (AB1395_00755) | comYC | 137116..137409 (+) | 294 | WP_367783523.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB1395_RS00760 (AB1395_00760) | comGD | 137390..137806 (+) | 417 | WP_278024843.1 | competence type IV pilus minor pilin ComGD | - |
| AB1395_RS00765 (AB1395_00765) | comGE | 137778..138077 (+) | 300 | WP_367783525.1 | competence type IV pilus minor pilin ComGE | - |
| AB1395_RS00770 (AB1395_00770) | comYF | 138055..138492 (+) | 438 | WP_367783527.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB1395_RS00775 (AB1395_00775) | comGG | 138470..138871 (+) | 402 | WP_367783529.1 | competence type IV pilus minor pilin ComGG | - |
| AB1395_RS00780 (AB1395_00780) | comYH | 138914..139867 (+) | 954 | WP_218653896.1 | class I SAM-dependent methyltransferase | Machinery gene |
| AB1395_RS00785 (AB1395_00785) | - | 139928..141118 (+) | 1191 | WP_316605957.1 | acetate kinase | - |
| AB1395_RS00790 (AB1395_00790) | - | 141481..141678 (+) | 198 | WP_218653898.1 | helix-turn-helix transcriptional regulator | - |
| AB1395_RS00795 (AB1395_00795) | - | 141691..142143 (+) | 453 | WP_218653899.1 | hypothetical protein | - |
| AB1395_RS00800 (AB1395_00800) | - | 142177..142848 (+) | 672 | WP_218653900.1 | CPBP family intramembrane glutamic endopeptidase | - |
| AB1395_RS00805 (AB1395_00805) | proC | 142893..143663 (-) | 771 | WP_367783533.1 | pyrroline-5-carboxylate reductase | - |
| AB1395_RS00810 (AB1395_00810) | pepA | 143703..144767 (-) | 1065 | WP_367783535.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35705.55 Da Isoelectric Point: 4.3566
>NTDB_id=1022571 AB1395_RS00780 WP_218653896.1 138914..139867(+) (comYH) [Streptococcus pluranimalium strain SS-15]
MNFEKIESAYQLILENTQLIENDIKTNIYDALIEQNAFYLGAENAPTKVAENNQALKDLQLSKEEWRRAYQFVFIKASQT
EKLQANHQFTPDAIGFLILYLLENLTSQEHLDVIEIGSGTGNLAQTLLNNSNRDLDYLGLELDDLLIDLSASIAEVMGAN
VSFVQEDAVRPQILKESDVIISDLPVGYYPNDAIAKRYQVAATDEHTYAHHLLMEQSLKYLKKDGLAILLAPTNLLTSGQ
SDLLKKWLAGYADILAVITLPETLFGNPANAKSLFVLQKQAKTKPETFVYHLSDIQNPEILQDFMENLKIWKDDNAI
MNFEKIESAYQLILENTQLIENDIKTNIYDALIEQNAFYLGAENAPTKVAENNQALKDLQLSKEEWRRAYQFVFIKASQT
EKLQANHQFTPDAIGFLILYLLENLTSQEHLDVIEIGSGTGNLAQTLLNNSNRDLDYLGLELDDLLIDLSASIAEVMGAN
VSFVQEDAVRPQILKESDVIISDLPVGYYPNDAIAKRYQVAATDEHTYAHHLLMEQSLKYLKKDGLAILLAPTNLLTSGQ
SDLLKKWLAGYADILAVITLPETLFGNPANAKSLFVLQKQAKTKPETFVYHLSDIQNPEILQDFMENLKIWKDDNAI
Nucleotide
Download Length: 954 bp
>NTDB_id=1022571 AB1395_RS00780 WP_218653896.1 138914..139867(+) (comYH) [Streptococcus pluranimalium strain SS-15]
ATGAATTTTGAAAAAATCGAATCAGCCTATCAGTTGATTTTAGAAAATACCCAGCTTATTGAAAATGACATTAAGACCAA
TATTTACGATGCTTTGATTGAGCAAAATGCCTTTTATTTGGGTGCTGAAAATGCTCCTACAAAAGTGGCTGAAAATAATC
AAGCCTTGAAAGATTTGCAACTGAGTAAAGAAGAATGGCGTCGTGCCTATCAGTTCGTTTTTATCAAGGCTAGTCAGACG
GAGAAACTTCAAGCCAATCATCAGTTTACACCAGATGCGATTGGCTTCTTGATACTTTATCTTTTGGAAAATTTGACCAG
TCAAGAGCATTTGGATGTGATTGAAATCGGTAGTGGAACTGGTAATTTGGCGCAAACCCTTCTAAATAATAGTAATCGTG
ATTTAGACTATCTCGGTTTGGAGTTGGATGATTTATTGATTGATTTATCAGCATCTATCGCAGAAGTGATGGGAGCAAAT
GTTAGCTTCGTTCAAGAAGATGCAGTGCGTCCACAGATTTTGAAAGAGAGTGACGTCATCATCAGTGATCTACCAGTTGG
TTATTATCCGAATGACGCTATCGCTAAACGTTATCAAGTAGCTGCTACTGATGAGCATACTTATGCGCATCATCTCTTGA
TGGAGCAATCCTTGAAGTATTTGAAAAAAGATGGTCTAGCGATTCTTTTGGCACCGACTAATCTCTTAACTAGTGGGCAA
AGTGATCTCTTGAAAAAATGGTTGGCAGGTTATGCAGATATCTTGGCAGTGATTACCTTACCAGAAACTTTATTTGGTAA
TCCGGCTAATGCTAAATCTCTGTTTGTCTTGCAAAAGCAGGCTAAAACTAAGCCGGAGACTTTTGTTTATCATTTGTCAG
ATATTCAAAATCCGGAAATTTTACAGGATTTTATGGAAAATTTGAAAATCTGGAAAGATGATAATGCCATTTAG
ATGAATTTTGAAAAAATCGAATCAGCCTATCAGTTGATTTTAGAAAATACCCAGCTTATTGAAAATGACATTAAGACCAA
TATTTACGATGCTTTGATTGAGCAAAATGCCTTTTATTTGGGTGCTGAAAATGCTCCTACAAAAGTGGCTGAAAATAATC
AAGCCTTGAAAGATTTGCAACTGAGTAAAGAAGAATGGCGTCGTGCCTATCAGTTCGTTTTTATCAAGGCTAGTCAGACG
GAGAAACTTCAAGCCAATCATCAGTTTACACCAGATGCGATTGGCTTCTTGATACTTTATCTTTTGGAAAATTTGACCAG
TCAAGAGCATTTGGATGTGATTGAAATCGGTAGTGGAACTGGTAATTTGGCGCAAACCCTTCTAAATAATAGTAATCGTG
ATTTAGACTATCTCGGTTTGGAGTTGGATGATTTATTGATTGATTTATCAGCATCTATCGCAGAAGTGATGGGAGCAAAT
GTTAGCTTCGTTCAAGAAGATGCAGTGCGTCCACAGATTTTGAAAGAGAGTGACGTCATCATCAGTGATCTACCAGTTGG
TTATTATCCGAATGACGCTATCGCTAAACGTTATCAAGTAGCTGCTACTGATGAGCATACTTATGCGCATCATCTCTTGA
TGGAGCAATCCTTGAAGTATTTGAAAAAAGATGGTCTAGCGATTCTTTTGGCACCGACTAATCTCTTAACTAGTGGGCAA
AGTGATCTCTTGAAAAAATGGTTGGCAGGTTATGCAGATATCTTGGCAGTGATTACCTTACCAGAAACTTTATTTGGTAA
TCCGGCTAATGCTAAATCTCTGTTTGTCTTGCAAAAGCAGGCTAAAACTAAGCCGGAGACTTTTGTTTATCATTTGTCAG
ATATTCAAAATCCGGAAATTTTACAGGATTTTATGGAAAATTTGAAAATCTGGAAAGATGATAATGCCATTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
67.405 |
99.685 |
0.672 |
| comYH | Streptococcus mutans UA159 |
67.089 |
99.685 |
0.669 |