Detailed information    

insolico Bioinformatically predicted

Overview


Name   pknB   Type   Regulator
Locus tag   ABZ559_RS01685 Genome accession   NZ_CP160400
Coordinates   347129..349042 (+) Length   637 a.a.
NCBI ID   WP_367007049.1    Uniprot ID   -
Organism   Streptococcus sp. ZY19097     
Function   modulate the activity of ComDE; modulate the activity of VicKR (predicted from homology)   
Competence regulation

Genomic Context


Location: 342129..354042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZ559_RS01670 (ABZ559_01670) fmt 344107..345042 (+) 936 WP_317334361.1 methionyl-tRNA formyltransferase -
  ABZ559_RS01675 (ABZ559_01675) rsmB 345032..346354 (+) 1323 WP_317334360.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  ABZ559_RS01680 (ABZ559_01680) - 346392..347129 (+) 738 WP_277290561.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  ABZ559_RS01685 (ABZ559_01685) pknB 347129..349042 (+) 1914 WP_367007049.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  ABZ559_RS01690 (ABZ559_01690) - 349195..350454 (+) 1260 WP_273413444.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -

Sequence


Protein


Download         Length: 637 a.a.        Molecular weight: 69677.30 Da        Isoelectric Point: 5.1626

>NTDB_id=1020913 ABZ559_RS01685 WP_367007049.1 347129..349042(+) (pknB) [Streptococcus sp. ZY19097]
MIQIGKLFAGRYRILKSIGRGGMADVYLANDLILDNEEVAIKVLRTNYQTDQIAVARFQREARAMAELNHPNIVAIRDIG
EEDGQQFLVMEYVDGADLKKYIHDRAPLSNTEVVRIMEEVLSAMTLAHQKGIVHRDLKPQNILLTKTGTVKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATVQSDIYAMGIMLFEMLTGHIPYDGDSAVTIALQHFQKPLPSIIAENKNVP
QALENVVIKATAKKLSDRYASTFEMSRDLMTALSYNRSREPKLVFQDTENTKPLPKAALAKPSQSTEQLLEKQKEKKERQ
IPPTPANKIETEQSQKDKQARKHNYFNTFTKVFVALFLLGVAIFTYLILNNPTTVSVPDVTNASLEVAKTKIESAGLKVG
EVHETASDQIEKNHVIKTNPTAGTKKREGSKIDIYVSTGTSGFTMPNYVGKNYENAIQELTKTYGVSEDNITVEEVSTTD
YEAGTIISQSPEAKATVDPENATISFTVAVSGSVTMPLVTNLTYADAVNTLTALGIKSSRIKAYVPSTSSASGYIEVHEP
ESSVLVSSQTPYYGTEIDVTDTSNIILYLYATTTESSSTEESSSESSSTSTSQESSTETSSSSSESSSTETESSSTR

Nucleotide


Download         Length: 1914 bp        

>NTDB_id=1020913 ABZ559_RS01685 WP_367007049.1 347129..349042(+) (pknB) [Streptococcus sp. ZY19097]
ATGATTCAGATTGGCAAATTATTTGCTGGTCGTTATCGGATCCTCAAATCTATCGGACGTGGCGGTATGGCGGATGTTTA
TCTGGCTAATGATCTGATTTTGGACAATGAAGAAGTTGCTATTAAGGTTCTTAGGACAAATTATCAGACAGATCAGATTG
CTGTGGCTCGCTTTCAGAGGGAAGCGAGAGCGATGGCAGAGCTAAATCATCCTAATATTGTTGCAATCCGAGATATTGGA
GAAGAAGACGGGCAGCAGTTCCTTGTGATGGAATATGTTGACGGCGCTGACCTAAAAAAGTATATCCATGATCGTGCACC
TTTATCAAATACAGAAGTTGTTCGCATTATGGAAGAAGTCTTATCGGCTATGACACTTGCCCACCAAAAGGGGATTGTCC
ACCGAGATTTGAAACCACAAAACATCCTCTTAACGAAGACAGGCACTGTCAAGGTTACGGATTTTGGCATTGCAGTTGCC
TTTGCAGAAACCAGTCTTACTCAGACAAATTCTATGCTTGGCTCAGTTCATTATCTCTCTCCAGAACAGGCGCGTGGCTC
TAAAGCAACTGTTCAGAGTGATATCTATGCTATGGGGATTATGCTTTTTGAAATGCTGACAGGTCATATTCCTTATGATG
GCGACTCAGCGGTGACAATTGCACTGCAACATTTTCAAAAACCTCTACCATCCATTATCGCTGAAAATAAGAACGTTCCA
CAGGCTTTAGAAAATGTTGTGATTAAGGCAACTGCGAAAAAACTTAGCGATCGTTATGCGTCAACTTTTGAAATGAGTCG
TGATTTGATGACGGCGTTGAGTTATAATCGTAGTCGTGAACCCAAATTAGTTTTTCAAGACACTGAGAACACTAAGCCCT
TACCTAAGGCTGCTCTTGCCAAACCTTCCCAATCAACAGAACAATTATTGGAGAAGCAAAAGGAAAAGAAAGAAAGGCAA
ATCCCTCCTACACCAGCTAACAAAATAGAGACGGAGCAGTCTCAAAAAGACAAACAGGCTCGAAAACATAACTATTTTAA
CACCTTTACAAAGGTCTTTGTAGCCTTGTTTTTGTTAGGAGTGGCTATATTTACCTATCTTATCTTAAATAATCCAACTA
CTGTTAGTGTTCCTGATGTGACGAATGCTAGTCTTGAAGTGGCTAAAACTAAGATTGAAAGTGCAGGCTTAAAGGTTGGC
GAAGTTCACGAAACTGCAAGTGATCAGATTGAGAAAAATCATGTTATCAAGACGAATCCGACAGCTGGTACGAAGAAACG
TGAAGGTTCAAAAATTGATATATACGTTTCTACAGGAACATCAGGCTTTACAATGCCAAATTATGTGGGCAAGAATTATG
AAAATGCTATCCAAGAGTTGACCAAGACCTATGGTGTATCAGAAGATAACATCACAGTTGAAGAGGTATCAACAACTGAT
TACGAGGCTGGTACAATTATTAGCCAAAGCCCAGAAGCTAAAGCAACAGTTGATCCTGAAAATGCTACGATTAGCTTTAC
AGTAGCTGTTTCTGGTTCAGTGACGATGCCACTAGTGACAAATCTAACCTATGCTGATGCTGTAAATACATTGACAGCTC
TAGGAATTAAATCTTCACGTATTAAGGCTTATGTACCAAGCACCTCATCAGCGAGTGGCTACATTGAAGTACATGAACCA
GAAAGTTCGGTATTGGTATCTTCACAAACACCTTATTATGGGACAGAGATAGATGTCACAGACACGAGTAACATTATTCT
CTATCTATACGCTACAACAACAGAATCGAGTTCGACCGAGGAATCAAGTTCTGAGTCATCTTCGACTTCAACCTCACAGG
AATCCTCGACTGAGACCTCATCAAGTAGTAGTGAGAGTTCATCAACTGAAACAGAATCAAGTTCAACACGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pknB Streptococcus mutans UA159

65.821

92.779

0.611

  stkP/pknB Streptococcus salivarius strain HSISS4

64.865

92.936

0.603

  stkP Streptococcus pneumoniae TIGR4

59.18

80.377

0.476

  stkP Streptococcus pneumoniae D39

58.984

80.377

0.474

  stkP Streptococcus pneumoniae R6

58.984

80.377

0.474

  stkP Streptococcus pneumoniae Rx1

58.789

80.377

0.473


Multiple sequence alignment