Detailed information NTG1020459

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABU188_RS01100
• Genome accession: NZ_CP160327
• Coordinates: 253324..254502 (+)
• Length: 392 a.a.
• NCBI ID: WP_367441846.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Acer10
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 248324..259502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU188_RS01080 (ABU188_12380)	-	249416..250624 (+)	1209	WP_370470415.1	PilT/PilU family type 4a pilus ATPase	-
ABU188_RS01085 (ABU188_12385)	murU	250730..251434 (+)	705	WP_367441853.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
ABU188_RS01090 (ABU188_12390)	ruvC	251554..252105 (+)	552	WP_100140820.1	crossover junction endodeoxyribonuclease RuvC	-
ABU188_RS01095 (ABU188_12395)	-	252215..253000 (-)	786	WP_370469874.1	DUF2071 domain-containing protein	-
ABU188_RS01100 (ABU188_12400)	dprA	253324..254502 (+)	1179	WP_367441846.1	DNA-processing protein DprA	Machinery gene
ABU188_RS01105 (ABU188_12405)	-	254514..254972 (+)	459	WP_367421149.1	DUF494 family protein	-
ABU188_RS01110 (ABU188_14330)	topA	255112..257406 (+)	2295	WP_370469875.1	type I DNA topoisomerase	-
ABU188_RS01115 (ABU188_12425)	rsmD	257485..258057 (+)	573	WP_367421153.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABU188_RS01120 (ABU188_12430)	-	258146..258400 (+)	255	WP_267409014.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42474.79 Da
• Isoelectric Point: 6.5012

>NTDB_id=1020459 ABU188_RS01100 WP_367441846.1 253324..254502(+) (dprA) [Snodgrassella alvi strain Acer10]
MNELERYAWIELALTPYIGSETFLRILKHFGSAQIALAADVAEIKPFLIRSRAGQYWRSEEARKAAEAALQWEQKHENAR
LLLLAENDYPPLLSEGLTPPPLLFIRGNIHYLQQPSLAIVGSRHATPQAMRIARDFAKALAQKEIAVISGMADGIDTAAH
QGALLGKGTTVAVWGTGIDRVYPARNKSLAAEIAEHGCIISEFPLGTRSLAGNFPRRNRLIAALSHGTLVIEAATESGSL
ITARLAGEMGREVMAIPGSINNPLSKGCHALIKQGAKLVENLDDILHECPFLLQKTQVHSYSHQSSQFIQSDTPVLLVEE
TEDLLLDKTAASALTSPEKQILDGLGYGIVHPDTLVSTLGIPATDVYANLMALELGGWITALPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=1020459 ABU188_RS01100 WP_367441846.1 253324..254502(+) (dprA) [Snodgrassella alvi strain Acer10]
ATGAATGAGCTCGAGCGCTATGCTTGGATTGAGCTGGCATTAACCCCCTATATTGGCAGTGAAACATTTTTACGTATCTT
AAAACATTTTGGTTCGGCACAAATCGCTTTGGCCGCAGATGTGGCGGAAATTAAACCTTTCCTGATTCGTTCTCGGGCCG
GTCAATACTGGCGCAGTGAGGAAGCAAGAAAAGCAGCTGAAGCCGCCCTGCAATGGGAGCAAAAGCATGAAAATGCACGC
TTATTATTGCTGGCTGAAAATGATTATCCACCATTGCTTTCTGAAGGTTTGACACCGCCTCCATTATTATTTATACGGGG
TAACATCCATTATCTGCAACAGCCCTCATTGGCTATTGTTGGCAGCCGACATGCTACGCCACAAGCAATGCGTATTGCCC
GTGATTTTGCCAAGGCATTAGCACAAAAAGAAATTGCTGTGATATCAGGCATGGCTGATGGTATAGATACCGCAGCCCAT
CAAGGTGCTTTACTTGGCAAAGGTACTACTGTTGCCGTCTGGGGTACAGGAATAGATCGCGTGTATCCGGCACGCAACAA
ATCATTGGCCGCTGAAATTGCCGAACATGGCTGTATAATTTCAGAATTTCCACTAGGCACACGTTCTTTGGCAGGTAATT
TCCCTCGTCGCAATCGCCTGATTGCAGCCCTCAGCCATGGTACCCTAGTGATAGAGGCTGCAACCGAATCTGGCTCCCTG
ATTACTGCGCGATTGGCCGGTGAAATGGGGCGTGAGGTTATGGCAATACCTGGTTCAATTAATAACCCATTAAGCAAAGG
TTGTCATGCATTGATAAAACAGGGTGCCAAACTGGTTGAAAATCTAGATGATATACTTCATGAGTGCCCTTTCCTCTTGC
AAAAAACGCAAGTGCATTCATATAGCCATCAATCTTCACAATTTATTCAATCAGATACACCTGTACTGCTTGTTGAAGAG
ACTGAAGATCTCTTATTAGACAAAACAGCTGCATCAGCACTCACATCGCCGGAGAAACAAATTCTGGATGGATTAGGTTA
TGGTATCGTACATCCAGATACACTGGTCTCAACACTTGGCATCCCTGCTACAGATGTGTATGCTAATCTTATGGCACTGG
AACTAGGTGGCTGGATTACCGCACTGCCGGGCGGTTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (76-280)

• DprA winged helix domain (DprA_WH) (329-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	57.561	100	0.602
dprA	Neisseria meningitidis MC58	57.561	100	0.602
dprA	Neisseria gonorrhoeae strain FA1090	58.458	100	0.599
dprA	Neisseria gonorrhoeae MS11	57.96	100	0.594
dprA	Vibrio cholerae strain A1552	38.363	99.745	0.383
dprA	Vibrio campbellii strain DS40M4	37.629	98.98	0.372