Detailed information NTG1020439

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABUW22_RS03835
• Genome accession: NZ_CP160326
• Coordinates: 863448..864626 (+)
• Length: 392 a.a.
• NCBI ID: WP_367412756.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Acer01
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 858448..869626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUW22_RS03815 (ABUW22_08840)	-	859541..860749 (+)	1209	WP_370387142.1	PilT/PilU family type 4a pilus ATPase	-
ABUW22_RS03820 (ABUW22_08845)	murU	860855..861559 (+)	705	WP_367417847.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
ABUW22_RS03825 (ABUW22_08850)	ruvC	861679..862230 (+)	552	WP_100140820.1	crossover junction endodeoxyribonuclease RuvC	-
ABUW22_RS03830 (ABUW22_08855)	-	862340..863125 (-)	786	WP_370387731.1	DUF2071 domain-containing protein	-
ABUW22_RS03835 (ABUW22_08860)	dprA	863448..864626 (+)	1179	WP_367412756.1	DNA-processing protein DprA	Machinery gene
ABUW22_RS03840 (ABUW22_08865)	-	864638..865096 (+)	459	WP_267392027.1	DUF494 family protein	-
ABUW22_RS03845 (ABUW22_08870)	topA	865236..867530 (+)	2295	WP_370387732.1	type I DNA topoisomerase	-
ABUW22_RS03850 (ABUW22_08875)	rsmD	867609..868181 (+)	573	WP_367417848.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABUW22_RS03855 (ABUW22_08880)	-	868270..868524 (+)	255	WP_267409014.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42492.84 Da
• Isoelectric Point: 6.2833

>NTDB_id=1020439 ABUW22_RS03835 WP_367412756.1 863448..864626(+) (dprA) [Snodgrassella alvi strain Acer01]
MNELERYAWIELALTPYIGSETFLRILKHFGSAQIALAADVAEIKPFLIRSRAGQYWRSEEARKAAEAALQWEQKHENAR
LLLLAENDYPPLLSEGLTPPPLLFIRGNIHYLQQPSLAIVGSRHATPQAMRIARDFAKALAQKEIAVISGMADGIDTAAH
QGALLGKGTTVAVWGTGIDRVYPARNKSLAAEIAEHGCIISEFPLGTRSLAGNFPRRNRLIAALSQGTLVIEAATESGSL
ITARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLDDILHECPFLLQKTQVHSYSHQSSQFIQLDTPVLLVEE
TEDLLLDKTAASALTSPEKQILDGLGYGIVHPDTLVSTLGIPATDVYANLMALELGGWITALPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=1020439 ABUW22_RS03835 WP_367412756.1 863448..864626(+) (dprA) [Snodgrassella alvi strain Acer01]
ATGAATGAGCTCGAGCGCTATGCTTGGATTGAGCTGGCATTAACACCTTATATTGGCAGTGAAACATTTTTACGTATCTT
AAAACATTTTGGTTCGGCACAAATCGCTTTGGCCGCAGATGTGGCAGAAATTAAACCTTTCCTGATTCGTTCTCGGGCCG
GTCAATACTGGCGCAGTGAGGAGGCAAGAAAAGCAGCTGAAGCCGCCCTGCAATGGGAGCAAAAGCATGAAAATGCACGC
TTATTATTGCTGGCTGAAAATGATTATCCACCATTGCTTTCTGAAGGTTTGACACCGCCTCCATTATTATTTATACGTGG
TAACATCCATTATCTGCAACAGCCCTCGTTGGCTATTGTTGGCAGCCGACATGCTACGCCACAAGCAATGCGTATTGCCC
GTGATTTTGCCAAAGCATTAGCACAAAAAGAAATTGCTGTGATATCGGGCATGGCTGATGGTATAGATACCGCAGCCCAT
CAAGGTGCTTTACTTGGCAAAGGTACTACTGTTGCCGTCTGGGGCACAGGAATTGATCGCGTGTATCCGGCACGCAACAA
ATCATTGGCTGCTGAAATTGCCGAACATGGCTGTATAATTTCAGAATTTCCACTAGGCACTCGTTCTTTGGCCGGTAACT
TTCCCCGTCGCAATCGCCTGATTGCAGCCCTCAGCCAAGGTACCCTAGTGATAGAGGCTGCAACCGAATCTGGCTCCCTG
ATTACTGCGCGATTGGCCGGTGAAATGGGTCGTGAAGTTATGGCAATACCTGGTTCGATTGATAACCCATTAAGCAAAGG
TTGTCATGCATTGATAAAACAGGGTGCCAAACTGGTTGAAAATCTAGATGATATACTGCATGAGTGCCCTTTCCTCTTGC
AAAAAACGCAAGTGCATTCATATAGCCATCAATCTTCACAATTTATTCAATTAGATACACCTGTACTGCTTGTTGAAGAG
ACTGAAGATCTCTTATTAGACAAAACAGCTGCATCAGCACTCACATCGCCGGAGAAACAAATTCTGGATGGATTAGGTTA
TGGTATCGTACATCCAGATACACTGGTCTCAACACTTGGCATCCCTGCTACAGATGTGTATGCTAATCTTATGGCGCTGG
AGCTAGGTGGCTGGATTACCGCACTGCCGGGCGGTTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (76-280)

• DprA winged helix domain (DprA_WH) (329-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.049	100	0.607
dprA	Neisseria meningitidis MC58	58.049	100	0.607
dprA	Neisseria gonorrhoeae strain FA1090	58.955	100	0.605
dprA	Neisseria gonorrhoeae MS11	58.458	100	0.599
dprA	Vibrio cholerae strain A1552	38.046	99.235	0.378
dprA	Vibrio campbellii strain DS40M4	37.887	98.98	0.375