Detailed information NTG1018221

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AB0962_RS01445
• Genome accession: NZ_CP160130
• Coordinates: 305654..306712 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain AB37-AUFP
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 300654..311712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0962_RS01430 (AB0962_01430)	-	301760..302092 (+)	333	WP_000169602.1	hypothetical protein	-
AB0962_RS01435 (AB0962_01435)	-	302095..302919 (+)	825	WP_086221410.1	putative RNA methyltransferase	-
AB0962_RS01440 (AB0962_01440)	ponA	302937..305492 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
AB0962_RS01445 (AB0962_01445)	pilM	305654..306712 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
AB0962_RS01450 (AB0962_01450)	pilN	306712..307353 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
AB0962_RS01455 (AB0962_01455)	pilO	307350..308090 (+)	741	WP_086379706.1	type 4a pilus biogenesis protein PilO	Machinery gene
AB0962_RS01460 (AB0962_01460)	pilP	308101..308628 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
AB0962_RS01465 (AB0962_01465)	pilQ	308696..310861 (+)	2166	WP_029424115.1	type IV pilus secretin PilQ family protein	Machinery gene
AB0962_RS01470 (AB0962_01470)	aroK	310873..311442 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=1018221 AB0962_RS01445 WP_002014066.1 305654..306712(+) (pilM) [Acinetobacter baumannii strain AB37-AUFP]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1018221 AB0962_RS01445 WP_002014066.1 305654..306712(+) (pilM) [Acinetobacter baumannii strain AB37-AUFP]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAACGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCCGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCATTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGATCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423