Detailed information NTG1017793

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: ABZT97_RS08905
• Genome accession: NZ_CP160082
• Coordinates: 1847471..1849630 (-)
• Length: 719 a.a.
• NCBI ID: WP_077959147.1
• Uniprot ID: -
• Organism: Lactobacillus gasseri strain CM2267_MRS2
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1842471..1854630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZT97_RS08870 (ABZT97_08880)	-	1843479..1843793 (-)	315	WP_077959138.1	bacteriocin immunity protein	-
ABZT97_RS08875 (ABZT97_08885)	-	1843918..1844319 (-)	402	WP_077959139.1	hypothetical protein	-
ABZT97_RS08880 (ABZT97_08890)	-	1844743..1845024 (-)	282	WP_077959141.1	hypothetical protein	-
ABZT97_RS08885 (ABZT97_08895)	-	1845411..1845653 (-)	243	WP_077959142.1	hypothetical protein	-
ABZT97_RS08890 (ABZT97_08900)	-	1846090..1846374 (-)	285	WP_077959144.1	bacteriocin immunity protein	-
ABZT97_RS08895 (ABZT97_08905)	-	1846521..1846805 (-)	285	WP_077959145.1	bacteriocin immunity protein	-
ABZT97_RS08900 (ABZT97_08910)	-	1846855..1847460 (-)	606	WP_077959146.1	HlyD family efflux transporter periplasmic adaptor subunit	-
ABZT97_RS08905 (ABZT97_08915)	comA	1847471..1849630 (-)	2160	WP_077959147.1	peptide cleavage/export ABC transporter	Regulator
ABZT97_RS08910 (ABZT97_08920)	-	1849643..1850440 (-)	798	WP_077959148.1	LytTR family DNA-binding domain-containing protein	-
ABZT97_RS08915 (ABZT97_08925)	-	1850437..1851756 (-)	1320	WP_102695642.1	sensor histidine kinase	-
ABZT97_RS08920 (ABZT97_08930)	-	1851747..1851899 (-)	153	WP_003649220.1	hypothetical protein	-
ABZT97_RS08925 (ABZT97_08935)	-	1852042..1853409 (-)	1368	WP_048684932.1	MFS transporter	-
ABZT97_RS08930 (ABZT97_08940)	udk	1853571..1854206 (+)	636	WP_003649222.1	uridine kinase	-

Sequence

Protein

• Length: 719 a.a.
• Molecular weight: 81111.41 Da
• Isoelectric Point: 7.7714

>NTDB_id=1017793 ABZT97_RS08905 WP_077959147.1 1847471..1849630(-) (comA) [Lactobacillus gasseri strain CM2267_MRS2]
MLFKYKSVYVPQVDEMDCGVACLAMILKQYHSRVSLAHLRHEARTNLEGTTALGLVKTAQKFNFKTEAVKADMSLFDENS
IQYPFIAHVLKQGELLHYYVVLKNAKNYLVIADPDPSVGVIKMPKDRFAQEWTGIALFMVPNEDFEPIKEKKNNLWSLFP
YMFKQKRLMINIILAALLMTIISICSSYFVQGIIDTYIPDGTYQTLSILAVGLLIAYVFNSIFSYGQNFLLNILGQRLSI
DLNLRYIRHIFELPMEFFVTRRTGEITSRFSDASRIIDALASTVISLFLDLSIVIVMGLVLAAQNMTLFGITLLALPIYA
VVILGFTKKFEKLNNEQMESNAVLSSSVIEDIQGIETIKALNSENTRYRRIDSQFVDYLKKSFKYSKTESLQTALKTFIQ
LSLNVIVLWVGAKIVMQGQLSIGQLMTFNALLAYFIDPLQSIINLQPRLQSASVAQNRLNEVYQVKSEFNQKATIEDRKL
LEGNIEYKNVDYSYGYGTDVLKDINLKISQGEKLTIVGMSGSGKSTMVKLLVDFFSPSKGQVTLNGHATSEIDKHTLRSY
VNYVPQTPYIFSGTVKENLLLGCRPDITEEDVIKACQIAEIDQEIANLPLQFETKLDENAKILSGGQKQRLTIARALLSP
AKVFIFDEVTSGLDTITEKKVVDNLMKLKDKTIIFIAHRLAIAERADKVVVIDHGQIVEEGSHSELMSKHGFYYDLVKG

Nucleotide

• Length: 2160 bp

>NTDB_id=1017793 ABZT97_RS08905 WP_077959147.1 1847471..1849630(-) (comA) [Lactobacillus gasseri strain CM2267_MRS2]
ATGTTATTCAAATATAAATCCGTATACGTGCCACAAGTGGATGAGATGGATTGCGGCGTTGCTTGTCTAGCAATGATCTT
AAAGCAATATCATTCTCGCGTATCTTTAGCACATTTACGTCATGAAGCTCGTACTAATCTTGAAGGCACAACTGCTTTAG
GACTAGTGAAGACAGCGCAAAAATTTAATTTCAAAACAGAAGCCGTAAAAGCAGATATGTCTTTATTTGATGAGAATAGT
ATTCAATATCCTTTTATTGCCCACGTCCTAAAACAAGGAGAACTACTTCATTATTACGTAGTTCTTAAAAATGCTAAGAA
TTATTTAGTAATTGCAGATCCTGATCCATCAGTTGGTGTAATAAAGATGCCTAAAGATAGGTTCGCTCAAGAATGGACAG
GAATTGCACTCTTTATGGTTCCTAACGAAGACTTTGAACCAATCAAAGAAAAGAAAAATAATTTATGGTCTCTCTTTCCA
TATATGTTTAAACAAAAGCGGCTGATGATTAACATCATTTTAGCCGCTTTATTAATGACCATAATTAGTATCTGTAGTTC
ATATTTTGTTCAAGGAATAATTGATACTTACATTCCAGATGGAACCTATCAGACTCTTTCGATCTTAGCTGTTGGACTAT
TAATTGCTTATGTCTTTAATTCAATTTTTTCTTATGGACAGAATTTTTTATTAAATATTTTAGGTCAAAGATTAAGTATT
GATCTAAATCTGCGATACATCAGGCATATTTTTGAATTACCAATGGAATTCTTTGTAACAAGAAGAACGGGTGAAATTAC
TTCGCGTTTTTCTGATGCAAGTAGAATTATTGACGCTTTGGCAAGTACAGTTATTTCGCTCTTCTTAGACCTCTCAATTG
TGATTGTGATGGGATTAGTCTTAGCAGCACAAAATATGACATTATTTGGGATTACACTGTTAGCTTTGCCTATTTATGCA
GTTGTAATTCTAGGTTTTACTAAAAAGTTTGAAAAACTAAATAACGAACAAATGGAAAGTAATGCTGTTTTGAGTTCTTC
AGTTATTGAAGATATTCAAGGAATTGAAACTATTAAAGCTTTAAATAGTGAGAATACAAGATATAGAAGAATCGATAGTC
AGTTTGTAGATTACTTAAAGAAGTCATTTAAATATAGTAAGACTGAGAGTTTACAGACAGCACTCAAGACATTTATTCAA
TTATCTCTTAATGTAATTGTTCTTTGGGTTGGTGCAAAGATTGTAATGCAAGGACAATTGAGCATTGGTCAGTTAATGAC
GTTCAATGCATTGCTGGCATATTTCATTGATCCCTTGCAAAGTATTATTAATTTACAACCGCGACTTCAATCAGCTAGTG
TTGCTCAAAATCGATTAAATGAGGTCTATCAAGTAAAAAGTGAATTCAATCAGAAGGCTACTATTGAAGATCGTAAGCTC
CTAGAAGGAAATATTGAATATAAGAATGTGGATTATAGCTATGGTTATGGCACAGATGTCTTAAAAGATATTAATCTCAA
AATTAGCCAGGGCGAAAAATTAACGATTGTTGGAATGAGTGGTTCTGGAAAATCTACGATGGTTAAGTTGTTAGTAGATT
TCTTTTCGCCAAGTAAAGGTCAGGTTACATTAAATGGACATGCAACAAGTGAGATTGATAAGCATACGTTGCGGTCATAT
GTAAATTATGTACCTCAAACTCCATATATATTTTCTGGAACAGTTAAAGAGAATTTGTTGTTAGGTTGTAGGCCAGATAT
CACTGAAGAAGATGTAATAAAGGCTTGTCAAATTGCTGAGATTGACCAAGAAATAGCTAATCTACCTTTGCAATTTGAAA
CAAAATTAGATGAAAATGCCAAAATTTTATCTGGTGGACAAAAACAAAGGTTAACTATTGCCCGGGCATTACTATCTCCT
GCAAAGGTATTTATTTTTGATGAAGTAACAAGTGGCTTAGATACAATTACTGAGAAGAAAGTGGTTGATAATTTGATGAA
GCTAAAGGATAAGACAATTATCTTTATTGCGCATCGACTAGCAATTGCAGAACGGGCAGACAAGGTAGTTGTAATTGATC
ATGGTCAAATAGTTGAAGAAGGCAGCCACAGCGAATTGATGAGTAAGCATGGTTTTTACTATGACTTAGTGAAGGGATAG

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (169-439)

• Peptidase C39 family (Peptidase_C39) (7-143)

• ABC transporter (ABC_tran) (501-651)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	57.865	99.026	0.573
comA	Streptococcus mitis SK321	57.584	99.026	0.57
comA	Streptococcus pneumoniae Rx1	57.444	99.026	0.569
comA	Streptococcus pneumoniae D39	57.444	99.026	0.569
comA	Streptococcus pneumoniae R6	57.444	99.026	0.569
comA	Streptococcus pneumoniae TIGR4	57.303	99.026	0.567
comA	Streptococcus gordonii str. Challis substr. CH1	55.618	99.026	0.551
comA/nlmT	Streptococcus mutans UA159	53.748	98.331	0.529