Detailed information NTG1016700

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABW387_RS09095
• Genome accession: NZ_CP159911
• Coordinates: 2080476..2081654 (+)
• Length: 392 a.a.
• NCBI ID: WP_370385778.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Amel02
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2075476..2086654

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABW387_RS09075 (ABW387_00985)	-	2076464..2077693 (+)	1230	WP_370386273.1	PilT/PilU family type 4a pilus ATPase	-
ABW387_RS09080 (ABW387_00980)	murU	2077825..2078526 (+)	702	WP_370385776.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
ABW387_RS09085 (ABW387_00975)	ruvC	2078657..2079208 (+)	552	WP_370385777.1	crossover junction endodeoxyribonuclease RuvC	-
ABW387_RS09090 (ABW387_00970)	-	2079306..2080091 (-)	786	WP_367465514.1	DUF2071 domain-containing protein	-
ABW387_RS09095 (ABW387_00965)	dprA	2080476..2081654 (+)	1179	WP_370385778.1	DNA-processing protein DprA	Machinery gene
ABW387_RS09100 (ABW387_00960)	-	2081666..2082124 (+)	459	WP_084586035.1	DUF494 family protein	-
ABW387_RS09105 (ABW387_00955)	topA	2082266..2084560 (+)	2295	WP_370385779.1	type I DNA topoisomerase	-
ABW387_RS09110 (ABW387_00950)	rsmD	2084639..2085211 (+)	573	WP_096766385.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABW387_RS09115 (ABW387_00945)	-	2085303..2085557 (+)	255	WP_037392355.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42113.07 Da
• Isoelectric Point: 6.4960

>NTDB_id=1016700 ABW387_RS09095 WP_370385778.1 2080476..2081654(+) (dprA) [Snodgrassella alvi strain Amel02]
MDTQERLAWIELALTPFVGAETFLRIIKYFGSAQNALSASAAEISPFGQRQVSKYWHSDVAKQATEAAIEWEQAHTDARL
LLLADNDFPAMLTKGLTPPPLLFVRGDSQCLHQPALSIVGSRHATPQAMRITRDFAAALAHKGVTIISGMASGADTAAHQ
GALQAMGTTVAVWGTGIDRVYPARNKNLATQIAAHGCIISEFPLATRPSPGNFPRRNRLIAALSQGTLVVEAATESGSLI
TARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLEDILQECPRLLQKKDLQSYSNRPHLQTDDISKSSTNTDS
SEDSLSVHSPDCILNPMEQQVLDGLGYGIMHPDMLVTALGMAATDVYAHLVTLELGGWITTLPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=1016700 ABW387_RS09095 WP_370385778.1 2080476..2081654(+) (dprA) [Snodgrassella alvi strain Amel02]
ATGGATACGCAAGAACGCTTAGCCTGGATTGAATTGGCATTAACTCCGTTTGTGGGGGCTGAAACTTTTCTTCGCATAAT
TAAATATTTTGGTTCCGCACAAAATGCTCTTAGTGCATCGGCTGCTGAAATATCGCCTTTTGGTCAACGGCAAGTCAGTA
AGTATTGGCATAGTGATGTAGCAAAACAGGCAACTGAAGCAGCTATAGAATGGGAGCAAGCGCATACTGATGCACGTTTA
TTACTACTGGCAGATAATGATTTTCCGGCAATGCTGACCAAGGGTTTAACACCGCCTCCATTATTGTTTGTTCGTGGTGA
TAGCCAGTGTTTGCATCAACCCGCTTTATCAATTGTTGGCAGTCGGCATGCTACACCACAAGCCATGCGCATTACTCGTG
ATTTTGCTGCTGCGCTGGCTCACAAAGGTGTAACAATTATTTCAGGTATGGCTAGTGGCGCAGATACAGCAGCACATCAG
GGTGCTTTGCAGGCAATGGGTACAACAGTGGCAGTTTGGGGTACAGGTATTGACAGAGTATATCCGGCACGCAACAAAAA
TTTAGCCACACAAATTGCTGCTCATGGCTGTATTATTTCTGAATTTCCCTTGGCTACTCGTCCTTCGCCCGGAAATTTTC
CGCGACGTAACCGCTTGATTGCTGCACTTAGTCAGGGTACGCTGGTAGTTGAAGCCGCAACTGAATCGGGCTCATTGATT
ACTGCAAGACTGGCTGGAGAAATGGGGCGGGAAGTTATGGCGATACCGGGTTCTATTGATAACCCTTTAAGTAAAGGCTG
CCACGCATTAATCAAACAAGGTGCCAAATTAGTAGAAAATCTGGAAGATATTTTGCAGGAATGTCCACGCCTCTTGCAAA
AAAAAGATTTGCAATCATATAGCAATCGTCCTCATCTGCAAACTGATGATATAAGTAAATCATCTACAAATACTGATAGT
TCAGAAGATTCATTATCAGTTCATTCACCAGATTGTATACTTAACCCGATGGAGCAGCAGGTGCTGGACGGACTGGGTTA
CGGCATAATGCATCCGGATATGTTAGTTACAGCACTTGGCATGGCTGCTACAGATGTGTATGCTCATCTCGTGACATTGG
AGCTTGGTGGCTGGATTACCACTCTGCCAGGCGGTTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (334-385)

• DNA recombination-mediator protein A (DNA_processg_A) (76-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.04	100	0.589
dprA	Neisseria meningitidis MC58	58.04	100	0.589
dprA	Neisseria gonorrhoeae strain FA1090	56.543	100	0.584
dprA	Neisseria gonorrhoeae MS11	56.296	100	0.582
dprA	Acinetobacter baumannii D1279779	37.24	97.959	0.365