Detailed information NTG1016621

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABVT50_RS02745
• Genome accession: NZ_CP159888
• Coordinates: 648462..649640 (+)
• Length: 392 a.a.
• NCBI ID: WP_369608793.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Acer04
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 643462..654640

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABVT50_RS02725 (ABVT50_08860)	-	644554..645762 (+)	1209	WP_370387142.1	PilT/PilU family type 4a pilus ATPase	-
ABVT50_RS02730 (ABVT50_08855)	murU	645868..646572 (+)	705	WP_369608792.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
ABVT50_RS02735 (ABVT50_08850)	ruvC	646693..647244 (+)	552	WP_100140820.1	crossover junction endodeoxyribonuclease RuvC	-
ABVT50_RS02740 (ABVT50_08845)	-	647354..648138 (-)	785	Protein_526	DUF2071 domain-containing protein	-
ABVT50_RS02745 (ABVT50_08840)	dprA	648462..649640 (+)	1179	WP_369608793.1	DNA-processing protein DprA	Machinery gene
ABVT50_RS02750 (ABVT50_08835)	-	649652..650110 (+)	459	WP_267392027.1	DUF494 family protein	-
ABVT50_RS02755 (ABVT50_15550)	topA	650250..652544 (+)	2295	WP_369608794.1	type I DNA topoisomerase	-
ABVT50_RS02760 (ABVT50_08795)	rsmD	652623..653195 (+)	573	WP_369608795.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABVT50_RS02765 (ABVT50_08790)	-	653284..653538 (+)	255	WP_100140814.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42466.76 Da
• Isoelectric Point: 6.2833

>NTDB_id=1016621 ABVT50_RS02745 WP_369608793.1 648462..649640(+) (dprA) [Snodgrassella alvi strain Acer04]
MNELERYAWIELALTPYIGSETFLRILKHFGSAQIALAADVAEIKPFLIRSRAGQYWRSEEARKAAEAALQWEQKHENAR
LLLLAENDYPPLLSEGLTPPPLLFIRGNIHYLQQPSLAIVGSRHATPQAMRIARDFAKALAQKEIAVISGMADGIDTAAH
QGALLGKGTTVAVWGTGIDRVYPARNKSLAAEIAEHGCIISEFPLGTRSLAGNFPRRNRLIAALSQGTLVIEAATESGSL
ITARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLDDILHECPFLLQKTQVHSYSHQSSQFIQSDTPVLLVEE
TEDLLLDKTAASALTSPEKQILDGLGYGIVHPDTLVSTLGIPATDVYANLMALELGGWITALPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=1016621 ABVT50_RS02745 WP_369608793.1 648462..649640(+) (dprA) [Snodgrassella alvi strain Acer04]
ATGAATGAGCTCGAGCGCTATGCTTGGATTGAGCTGGCATTAACCCCCTATATTGGCAGTGAAACATTTTTACGTATCTT
AAAACATTTTGGTTCGGCACAAATCGCTTTGGCCGCAGATGTGGCTGAAATTAAACCTTTCCTGATTCGTTCTCGGGCCG
GTCAATACTGGCGCAGTGAGGAAGCAAGAAAAGCAGCTGAAGCCGCCCTGCAATGGGAGCAAAAGCATGAAAATGCACGC
TTATTATTGCTGGCTGAAAATGATTATCCACCATTGCTTTCTGAAGGTTTGACACCGCCTCCATTATTATTTATACGTGG
TAACATCCATTATCTGCAACAGCCCTCATTGGCTATTGTTGGCAGCCGACATGCTACGCCACAAGCAATGCGTATTGCCC
GTGATTTTGCCAAGGCATTAGCACAAAAAGAAATTGCTGTGATATCGGGCATGGCTGATGGTATAGATACCGCAGCCCAT
CAAGGTGCTTTACTTGGCAAAGGTACTACTGTTGCCGTCTGGGGCACAGGAATTGATCGCGTGTATCCGGCACGCAACAA
ATCATTGGCTGCTGAAATTGCCGAACATGGCTGTATAATTTCAGAATTTCCACTAGGCACTCGTTCTCTGGCCGGTAACT
TTCCCCGTCGCAATCGCCTGATTGCAGCCCTCAGCCAAGGTACCCTAGTGATAGAGGCTGCAACCGAATCTGGCTCCCTG
ATTACTGCGCGATTGGCCGGTGAAATGGGTCGTGAAGTTATGGCAATACCTGGTTCGATTGATAACCCATTAAGCAAAGG
TTGTCATGCATTGATAAAACAGGGTGCCAAACTGGTTGAAAATCTAGATGATATACTTCATGAGTGCCCTTTCCTCTTGC
AAAAAACGCAAGTGCATTCATATAGCCATCAATCTTCACAATTTATTCAATCAGATACACCTGTACTGCTTGTTGAAGAG
ACTGAAGATCTCTTATTAGACAAAACAGCTGCATCAGCACTCACATCGCCGGAGAAACAAATCCTGGATGGATTAGGTTA
TGGTATCGTACATCCAGATACACTGGTCTCAACACTTGGCATCCCTGCTACAGATGTGTATGCTAATCTTATGGCACTGG
AACTAGGTGGCTGGATTACCGCACTGCCGGGCGGTTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (76-280)

• DprA winged helix domain (DprA_WH) (329-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.049	100	0.607
dprA	Neisseria meningitidis MC58	58.049	100	0.607
dprA	Neisseria gonorrhoeae strain FA1090	58.955	100	0.605
dprA	Neisseria gonorrhoeae MS11	58.458	100	0.599
dprA	Vibrio cholerae strain A1552	37.975	100	0.383
dprA	Vibrio campbellii strain DS40M4	37.371	98.98	0.37