Detailed information NTG1015758

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABVQ18_RS03520
• Genome accession: NZ_CP159767
• Coordinates: 812311..813489 (+)
• Length: 392 a.a.
• NCBI ID: WP_367412756.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Acer05
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 807311..818489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABVQ18_RS03500 (ABVQ18_14960)	-	808402..809610 (+)	1209	WP_370387142.1	PilT/PilU family type 4a pilus ATPase	-
ABVQ18_RS03505 (ABVQ18_14965)	murU	809716..810420 (+)	705	WP_267392022.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
ABVQ18_RS03510 (ABVQ18_14970)	ruvC	810541..811092 (+)	552	WP_267392024.1	crossover junction endodeoxyribonuclease RuvC	-
ABVQ18_RS03515 (ABVQ18_14975)	-	811202..811987 (-)	786	WP_370386584.1	DUF2071 domain-containing protein	-
ABVQ18_RS03520 (ABVQ18_14980)	dprA	812311..813489 (+)	1179	WP_367412756.1	DNA-processing protein DprA	Machinery gene
ABVQ18_RS03525 (ABVQ18_14985)	-	813501..813959 (+)	459	WP_367421149.1	DUF494 family protein	-
ABVQ18_RS03530 (ABVQ18_16665)	topA	814099..816393 (+)	2295	WP_370388526.1	type I DNA topoisomerase	-
ABVQ18_RS03535 (ABVQ18_15010)	rsmD	816472..817044 (+)	573	WP_370388527.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABVQ18_RS03540 (ABVQ18_15015)	-	817133..817387 (+)	255	WP_100140814.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42492.84 Da
• Isoelectric Point: 6.2833

>NTDB_id=1015758 ABVQ18_RS03520 WP_367412756.1 812311..813489(+) (dprA) [Snodgrassella alvi strain Acer05]
MNELERYAWIELALTPYIGSETFLRILKHFGSAQIALAADVAEIKPFLIRSRAGQYWRSEEARKAAEAALQWEQKHENAR
LLLLAENDYPPLLSEGLTPPPLLFIRGNIHYLQQPSLAIVGSRHATPQAMRIARDFAKALAQKEIAVISGMADGIDTAAH
QGALLGKGTTVAVWGTGIDRVYPARNKSLAAEIAEHGCIISEFPLGTRSLAGNFPRRNRLIAALSQGTLVIEAATESGSL
ITARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLDDILHECPFLLQKTQVHSYSHQSSQFIQLDTPVLLVEE
TEDLLLDKTAASALTSPEKQILDGLGYGIVHPDTLVSTLGIPATDVYANLMALELGGWITALPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=1015758 ABVQ18_RS03520 WP_367412756.1 812311..813489(+) (dprA) [Snodgrassella alvi strain Acer05]
ATGAATGAGCTCGAGCGCTATGCTTGGATTGAGCTGGCATTAACCCCCTATATTGGCAGTGAAACATTTTTACGTATCTT
AAAACATTTTGGTTCGGCACAAATCGCTTTGGCCGCAGATGTGGCAGAAATTAAACCTTTCCTGATTCGTTCTCGGGCCG
GTCAATACTGGCGCAGTGAGGAGGCAAGAAAAGCAGCTGAAGCCGCCCTGCAATGGGAGCAAAAGCATGAAAATGCACGC
TTATTATTGCTGGCTGAAAATGATTATCCACCATTGCTTTCTGAAGGTTTGACACCGCCTCCATTATTATTTATACGTGG
TAACATCCATTATCTGCAACAGCCCTCGTTGGCTATTGTTGGCAGCCGACATGCTACGCCACAAGCAATGCGTATTGCCC
GTGATTTTGCCAAGGCATTAGCACAAAAAGAAATTGCTGTGATATCGGGCATGGCTGATGGTATAGATACCGCAGCCCAT
CAAGGTGCTTTACTTGGCAAAGGTACTACTGTTGCCGTCTGGGGCACAGGAATTGATCGCGTGTATCCGGCACGCAACAA
ATCATTGGCTGCTGAAATTGCCGAACATGGCTGTATAATTTCAGAATTTCCACTAGGCACTCGTTCTTTGGCCGGTAACT
TTCCCCGTCGCAATCGCCTGATTGCAGCCCTCAGCCAAGGTACCCTAGTGATAGAGGCTGCAACCGAATCAGGCTCCCTG
ATTACTGCGCGATTGGCCGGTGAAATGGGTCGTGAAGTTATGGCAATACCTGGTTCGATTGATAACCCATTAAGCAAAGG
TTGTCATGCATTGATAAAACAGGGTGCCAAACTGGTTGAAAATCTAGATGATATACTGCATGAGTGCCCTTTCCTCTTGC
AAAAAACGCAAGTGCATTCATATAGCCATCAATCTTCACAATTTATTCAATTAGATACACCTGTACTGCTTGTTGAAGAG
ACTGAAGATCTCTTATTAGACAAAACAGCTGCATCAGCACTCACATCGCCGGAGAAACAAATTCTGGATGGATTAGGTTA
TGGTATCGTACATCCAGATACACTGGTCTCAACACTTGGCATCCCTGCTACAGATGTGTATGCTAATCTTATGGCACTGG
AGCTAGGTGGCTGGATTACCGCACTGCCGGGCGGTTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (76-280)

• DprA winged helix domain (DprA_WH) (329-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.049	100	0.607
dprA	Neisseria meningitidis MC58	58.049	100	0.607
dprA	Neisseria gonorrhoeae strain FA1090	58.955	100	0.605
dprA	Neisseria gonorrhoeae MS11	58.458	100	0.599
dprA	Vibrio cholerae strain A1552	38.046	99.235	0.378
dprA	Vibrio campbellii strain DS40M4	37.887	98.98	0.375