Detailed information NTG1015656

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABV523_RS00530
• Genome accession: NZ_CP159758
• Coordinates: 110274..111452 (-)
• Length: 392 a.a.
• NCBI ID: WP_369608793.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Acer02
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 105274..116452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABV523_RS00510 (ABV523_10535)	-	106376..106630 (-)	255	WP_100140814.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ABV523_RS00515 (ABV523_10530)	rsmD	106719..107291 (-)	573	WP_369608795.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABV523_RS00520 (ABV523_10525)	topA	107370..109664 (-)	2295	WP_369608794.1	type I DNA topoisomerase	-
ABV523_RS00525 (ABV523_10520)	-	109804..110262 (-)	459	WP_267392027.1	DUF494 family protein	-
ABV523_RS00530 (ABV523_10515)	dprA	110274..111452 (-)	1179	WP_369608793.1	DNA-processing protein DprA	Machinery gene
ABV523_RS00535 (ABV523_16090)	-	111776..112560 (+)	785	Protein_89	DUF2071 domain-containing protein	-
ABV523_RS00540 (ABV523_10500)	ruvC	112670..113221 (-)	552	WP_100140820.1	crossover junction endodeoxyribonuclease RuvC	-
ABV523_RS00545 (ABV523_10495)	murU	113342..114046 (-)	705	WP_369608792.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
ABV523_RS00550 (ABV523_10490)	-	114152..115483 (-)	1332	WP_369608989.1	PilT/PilU family type 4a pilus ATPase	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42466.76 Da
• Isoelectric Point: 6.2833

>NTDB_id=1015656 ABV523_RS00530 WP_369608793.1 110274..111452(-) (dprA) [Snodgrassella alvi strain Acer02]
MNELERYAWIELALTPYIGSETFLRILKHFGSAQIALAADVAEIKPFLIRSRAGQYWRSEEARKAAEAALQWEQKHENAR
LLLLAENDYPPLLSEGLTPPPLLFIRGNIHYLQQPSLAIVGSRHATPQAMRIARDFAKALAQKEIAVISGMADGIDTAAH
QGALLGKGTTVAVWGTGIDRVYPARNKSLAAEIAEHGCIISEFPLGTRSLAGNFPRRNRLIAALSQGTLVIEAATESGSL
ITARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLDDILHECPFLLQKTQVHSYSHQSSQFIQSDTPVLLVEE
TEDLLLDKTAASALTSPEKQILDGLGYGIVHPDTLVSTLGIPATDVYANLMALELGGWITALPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=1015656 ABV523_RS00530 WP_369608793.1 110274..111452(-) (dprA) [Snodgrassella alvi strain Acer02]
ATGAATGAGCTCGAGCGCTATGCTTGGATTGAGCTGGCATTAACCCCCTATATTGGCAGTGAAACATTTTTACGTATCTT
AAAACATTTTGGTTCGGCACAAATCGCTTTGGCCGCAGATGTGGCTGAAATTAAACCTTTCCTGATTCGTTCTCGGGCCG
GTCAATACTGGCGCAGTGAGGAAGCAAGAAAAGCAGCTGAAGCCGCCCTGCAATGGGAGCAAAAGCATGAAAATGCACGC
TTATTATTGCTGGCTGAAAATGATTATCCACCATTGCTTTCTGAAGGTTTGACACCGCCTCCATTATTATTTATACGTGG
TAACATCCATTATCTGCAACAGCCCTCATTGGCTATTGTTGGCAGCCGACATGCTACGCCACAAGCAATGCGTATTGCCC
GTGATTTTGCCAAGGCATTAGCACAAAAAGAAATTGCTGTGATATCGGGCATGGCTGATGGTATAGATACCGCAGCCCAT
CAAGGTGCTTTACTTGGCAAAGGTACTACTGTTGCCGTCTGGGGCACAGGAATTGATCGCGTGTATCCGGCACGCAACAA
ATCATTGGCTGCTGAAATTGCCGAACATGGCTGTATAATTTCAGAATTTCCACTAGGCACTCGTTCTCTGGCCGGTAACT
TTCCCCGTCGCAATCGCCTGATTGCAGCCCTCAGCCAAGGTACCCTAGTGATAGAGGCTGCAACCGAATCTGGCTCCCTG
ATTACTGCGCGATTGGCCGGTGAAATGGGTCGTGAAGTTATGGCAATACCTGGTTCGATTGATAACCCATTAAGCAAAGG
TTGTCATGCATTGATAAAACAGGGTGCCAAACTGGTTGAAAATCTAGATGATATACTTCATGAGTGCCCTTTCCTCTTGC
AAAAAACGCAAGTGCATTCATATAGCCATCAATCTTCACAATTTATTCAATCAGATACACCTGTACTGCTTGTTGAAGAG
ACTGAAGATCTCTTATTAGACAAAACAGCTGCATCAGCACTCACATCGCCGGAGAAACAAATCCTGGATGGATTAGGTTA
TGGTATCGTACATCCAGATACACTGGTCTCAACACTTGGCATCCCTGCTACAGATGTGTATGCTAATCTTATGGCACTGG
AACTAGGTGGCTGGATTACCGCACTGCCGGGCGGTTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (76-280)

• DprA winged helix domain (DprA_WH) (329-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.049	100	0.607
dprA	Neisseria meningitidis MC58	58.049	100	0.607
dprA	Neisseria gonorrhoeae strain FA1090	58.955	100	0.605
dprA	Neisseria gonorrhoeae MS11	58.458	100	0.599
dprA	Vibrio cholerae strain A1552	37.975	100	0.383
dprA	Vibrio campbellii strain DS40M4	37.371	98.98	0.37