Detailed information NTG1013816

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: ABVR74_RS02980
• Genome accession: NZ_CP159484
• Coordinates: 565727..567937 (+)
• Length: 736 a.a.
• NCBI ID: WP_353891772.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain CBA3648
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 560727..572937

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABVR74_RS02955 (ABVR74_02955)	-	561579..562142 (+)	564	WP_251900925.1	GNAT family N-acetyltransferase	-
ABVR74_RS02960 (ABVR74_02960)	-	562246..562644 (+)	399	WP_023188528.1	hypothetical protein	-
ABVR74_RS02965 (ABVR74_02965)	-	562749..563681 (+)	933	WP_353891771.1	ABC transporter ATP-binding protein	-
ABVR74_RS02970 (ABVR74_02970)	-	563678..565039 (+)	1362	WP_313791934.1	ABC transporter permease	-
ABVR74_RS02975 (ABVR74_02975)	comEA	565099..565746 (+)	648	WP_010906131.1	ComEA family DNA-binding protein	Machinery gene
ABVR74_RS02980 (ABVR74_02980)	comEC	565727..567937 (+)	2211	WP_353891772.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ABVR74_RS02985 (ABVR74_02985)	-	568222..568998 (+)	777	WP_023188533.1	alpha/beta hydrolase family protein	-
ABVR74_RS02990 (ABVR74_02990)	-	569183..569398 (+)	216	WP_004255250.1	F0F1 ATP synthase subunit C	-
ABVR74_RS02995 (ABVR74_02995)	atpB	569443..570156 (+)	714	WP_004255255.1	F0F1 ATP synthase subunit A	-
ABVR74_RS03000 (ABVR74_03000)	atpF	570171..570677 (+)	507	WP_010906128.1	F0F1 ATP synthase subunit B	-
ABVR74_RS03005 (ABVR74_03005)	-	570679..571206 (+)	528	WP_012898339.1	F0F1 ATP synthase subunit delta	-
ABVR74_RS03010 (ABVR74_03010)	atpA	571393..572895 (+)	1503	WP_004255265.1	F0F1 ATP synthase subunit alpha	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 84571.10 Da
• Isoelectric Point: 9.6246

>NTDB_id=1013816 ABVR74_RS02980 WP_353891772.1 565727..567937(+) (comEC) [Lactococcus lactis subsp. lactis strain CBA3648]
MSCVLNKIPLIFLAYLSVILYFLIFNFNLLCLILFIFSSLLASYRKYYLVIPFLLVMGSFFLVVKMDTIKNSENQPTTLS
KITMIPDTIQVNGDLLSFQGKERDQNYQVYETLKSKKEQKFYQNLSQNCQLSFTGNLQIPEKQRNFNGFDNQKYLASQDI
YRQITIDKINKIVLNDTFDLRVLRRKAIVWSQTHFPKPMNDYMTGLLFGFLSKDFNQIGDIYSSLGIIHLFALSGMQVNF
FIDWFRRIILRLGITREKLNIWQIPFSIFYAFMTGFSVSVLRALFQKNIRLNPLDNLAVTTFLLMIVSPKFLLTTGGQLT
LFYAFVISMINHKFSELKGIRKLLTESSVISLSVLPLLILDFHIFQPFSILLTIGFGFLFDVILLPLLLGTFLLSLIGYN
FNINYIFQILEWLIHEVDLPLHYPLVLGNPRPIELLILFFLIGLLNDNLFKKRRQIIFAGLIVCSFFICKNPIYPSITAV
DIGQGDSIFLQDKFNKETILIDTGGRLALPQESWQKPQSQTNAEKTLIPYLESVGVSQIDQLILTHTDADHVGDFLNLAD
KIKIKEIWVSPGELTNNHFVEKLKKANIAIHISKVGDKIPIFDSALQVLSNGYTGKGDNNDSIVTYGNFYHTKFLFTGDL
EQEGEKELLKNYPKLKVDVLKVGHHGSKTSSNSDFIKEINPKLALISVGEKNRYGHPNQETLETLKKNQIRILRTDQKGA
LKLMQINQQWRIQTVR

Nucleotide

• Length: 2211 bp

>NTDB_id=1013816 ABVR74_RS02980 WP_353891772.1 565727..567937(+) (comEC) [Lactococcus lactis subsp. lactis strain CBA3648]
ATGAGTTGTGTTTTGAATAAAATTCCTTTGATATTTTTAGCTTATCTTTCTGTTATCTTGTATTTTTTAATCTTCAATTT
TAATTTACTTTGTCTCATTTTGTTCATTTTTTCAAGTTTACTTGCCTCATATAGAAAATATTATTTAGTCATCCCATTTT
TATTAGTTATGGGAAGTTTTTTCTTAGTAGTAAAAATGGATACGATTAAGAATAGTGAAAATCAGCCAACCACTCTTTCC
AAAATTACAATGATCCCCGACACTATCCAAGTTAATGGTGATTTACTAAGTTTTCAAGGAAAAGAAAGAGACCAAAATTA
TCAAGTTTACGAGACTCTAAAAAGTAAAAAAGAACAAAAATTTTATCAAAATCTAAGTCAAAATTGTCAGCTGAGTTTCA
CAGGAAACCTTCAAATTCCAGAAAAACAAAGAAATTTTAATGGATTCGATAATCAAAAGTATTTAGCGAGCCAGGATATT
TATCGGCAAATTACGATTGATAAAATTAATAAAATAGTTTTAAACGACACTTTTGACCTCCGTGTTTTAAGACGAAAAGC
AATTGTCTGGTCACAAACTCATTTTCCAAAGCCAATGAATGATTATATGACTGGCTTACTTTTTGGCTTTTTAAGTAAAG
ATTTTAATCAAATAGGAGACATTTACAGTTCATTAGGAATTATTCATCTTTTTGCCTTATCGGGAATGCAAGTTAATTTT
TTCATTGATTGGTTTCGTAGAATTATTCTTCGACTAGGAATAACGAGAGAAAAATTAAATATTTGGCAAATTCCCTTTTC
AATTTTTTATGCATTTATGACAGGATTTTCGGTTTCAGTATTACGAGCTTTATTTCAAAAAAATATTCGTCTAAATCCTT
TAGATAACCTAGCAGTGACAACCTTTCTTCTGATGATTGTCAGTCCTAAATTTTTACTGACAACAGGAGGACAACTAACT
TTATTTTATGCTTTTGTCATTTCAATGATTAATCATAAATTTTCAGAACTAAAAGGAATAAGAAAATTACTGACAGAATC
ATCAGTGATTTCTTTGAGTGTTTTACCTTTACTCATTTTGGATTTTCATATCTTTCAGCCTTTTTCAATTTTACTGACGA
TTGGCTTTGGCTTTTTATTTGATGTAATCTTATTGCCTTTACTATTAGGAACTTTTCTCTTGTCTCTAATTGGCTATAAT
TTTAATATAAATTATATTTTTCAAATTCTAGAATGGCTAATTCATGAGGTTGATTTACCCTTACATTATCCTTTGGTTTT
AGGGAATCCCCGGCCAATTGAATTATTAATCTTATTTTTCCTAATCGGTTTGTTAAATGATAATCTCTTTAAGAAAAGAA
GACAAATAATTTTTGCTGGCCTAATTGTTTGTAGTTTTTTTATTTGTAAAAATCCAATTTACCCCAGTATCACAGCAGTT
GATATTGGTCAAGGAGATAGTATTTTTTTGCAAGATAAATTTAATAAAGAAACAATTTTGATTGATACAGGCGGACGATT
AGCCCTTCCGCAAGAAAGTTGGCAAAAACCTCAAAGTCAAACAAATGCCGAAAAAACACTCATTCCATATCTTGAATCTG
TTGGAGTAAGTCAAATCGACCAGCTCATTTTGACGCATACGGACGCTGACCATGTTGGAGATTTTTTGAATTTAGCTGAT
AAAATAAAAATAAAAGAAATTTGGGTTAGCCCCGGTGAACTGACAAATAATCATTTTGTAGAAAAATTGAAGAAAGCAAA
TATTGCGATTCACATCAGTAAAGTTGGAGATAAAATTCCAATCTTTGATAGTGCTTTACAAGTTTTATCAAATGGTTATA
CAGGAAAAGGGGATAATAATGATTCTATCGTGACTTATGGAAATTTTTATCATACAAAATTTCTATTTACAGGGGATTTA
GAACAAGAAGGAGAAAAAGAACTGCTCAAGAATTATCCTAAATTGAAAGTTGATGTCTTAAAAGTAGGTCATCATGGCAG
TAAAACAAGTTCAAACTCTGACTTTATTAAAGAAATTAATCCCAAACTTGCCCTCATTTCGGTTGGAGAGAAAAATCGAT
ATGGACATCCCAATCAAGAAACTTTAGAAACATTAAAAAAAAACCAAATCAGAATACTTAGAACCGATCAAAAGGGAGCG
CTTAAACTAATGCAAATCAATCAACAGTGGCGAATCCAAACAGTTAGATAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (28-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (483-689)

• Competence protein (Competence) (206-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	76.495	100	0.765
comEC/celB	Streptococcus mitis SK321	44.624	100	0.451
comEC/celB	Streptococcus mitis NCTC 12261	44.415	100	0.448
comEC/celB	Streptococcus pneumoniae TIGR4	43.414	100	0.439
comEC/celB	Streptococcus pneumoniae Rx1	43.011	100	0.435
comEC/celB	Streptococcus pneumoniae D39	43.011	100	0.435
comEC/celB	Streptococcus pneumoniae R6	43.011	100	0.435