Detailed information NTG1010533

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABRA92_RS02710
• Genome accession: NZ_CP158305
• Coordinates: 554699..555742 (+)
• Length: 347 a.a.
• NCBI ID: WP_005478550.1
• Uniprot ID: Q87LR1
• Organism: Vibrio parahaemolyticus strain VP93
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 549699..560742

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABRA92_RS02695	rpoS	550289..551290 (+)	1002	WP_350225696.1	RNA polymerase sigma factor RpoS	Regulator
ABRA92_RS02700	mutS	551370..553931 (-)	2562	WP_015297264.1	DNA mismatch repair protein MutS	-
ABRA92_RS02705	pncC	554016..554498 (+)	483	WP_015297263.1	nicotinamide-nucleotide amidase	-
ABRA92_RS02710	recA	554699..555742 (+)	1044	WP_005478550.1	recombinase RecA	Machinery gene
ABRA92_RS02715	recX	555866..556333 (+)	468	WP_005455548.1	recombination regulator RecX	-
ABRA92_RS02720	alaS	556476..559058 (+)	2583	WP_350225697.1	alanine--tRNA ligase	-
ABRA92_RS02725	-	559261..560448 (+)	1188	WP_005478552.1	aspartate kinase	-
ABRA92_RS02730	csrA	560541..560738 (+)	198	WP_004415691.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37432.91 Da
• Isoelectric Point: 5.1850

>NTDB_id=1010533 ABRA92_RS02710 WP_005478550.1 554699..555742(+) (recA) [Vibrio parahaemolyticus strain VP93]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYNGDKIGQGKANACNYLREHPEIAKTIDT
KLREMLLSPAQPEAPAAGEKPEQEEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=1010533 ABRA92_RS02710 WP_005478550.1 554699..555742(+) (recA) [Vibrio parahaemolyticus strain VP93]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
CCTTGGTGATAACCGCGCAATGGATGTAGAAACCATTTCAACGGGTTCGCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GTCTACCAATGGGGCGTATCGTAGAAATCTACGGTCCAGAATCTTCAGGTAAAACAACGCTAACTCTTGAGCTTATCGCT
GCTGCACAACGTGAAGGTAAAACTTGTGCGTTTATCGATGCTGAGCACGCGTTGGATCCTGTGTACGCTAAAAAGCTTGG
TGTTGATATTGATGCGCTATTGGTATCTCAGCCAGACACTGGTGAGCAAGCTCTAGAGATTTGTGATGCATTAGCTCGCT
CTGGTGCAATCGACGTAATGGTTGTTGACTCTGTTGCTGCTCTAACACCTAAAGCTGAGATCGAAGGTGAAATGGGCGAC
AGCCACATGGGTCTCCAAGCTCGTATGCTTTCTCAAGCAATGCGTAAGCTTACAGGTAACCTGAAACAGTCTAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTCGGTAACCCTGAAACGACTACTGGCGGTAACGCGC
TTAAGTTTTACGCTTCTGTTCGTTTAGATATCCGTCGTACTGGCGCAATCAAAGAAGGCGATGAAGTTGTAGGTAACGAA
ACGCGTATCAAAGTGGTTAAGAACAAGATTGCAGCACCATTTAAAGAAGCAAACACGCAAATCATGTATGGCCAAGGCTT
TAACCGTGAAGGTGAGTTGATTGACTTAGGCGTGAAGCACAAGCTAGTAGAAAAAGCGGGTGCTTGGTACAGCTACAATG
GCGATAAGATTGGTCAAGGTAAAGCAAACGCTTGTAACTACCTGCGTGAGCATCCAGAAATCGCGAAAACAATCGATACC
AAACTGCGTGAAATGCTACTTTCTCCAGCTCAACCAGAAGCACCTGCTGCCGGTGAGAAGCCTGAGCAAGAAGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: Q87LR1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	91.643	100	0.916
recA	Vibrio cholerae O1 biovar El Tor strain E7946	91.643	100	0.916
recA	Pseudomonas stutzeri DSM 10701	72.941	97.983	0.715
recA	Acinetobacter baylyi ADP1	72.303	98.847	0.715
recA	Acinetobacter baumannii D1279779	74.695	94.524	0.706
recA	Glaesserella parasuis strain SC1401	70.859	93.948	0.666
recA	Neisseria gonorrhoeae MS11	65.903	100	0.663
recA	Neisseria gonorrhoeae MS11	65.903	100	0.663
recA	Neisseria gonorrhoeae strain FA1090	65.903	100	0.663
recA	Ralstonia pseudosolanacearum GMI1000	71.383	89.625	0.64
recA	Helicobacter pylori 26695	60.294	97.983	0.591
recA	Helicobacter pylori strain NCTC11637	62.08	94.236	0.585
recA	Streptococcus pneumoniae Rx1	62.848	93.084	0.585
recA	Streptococcus pneumoniae R6	62.848	93.084	0.585
recA	Streptococcus pneumoniae D39	62.848	93.084	0.585
recA	Streptococcus pneumoniae TIGR4	62.848	93.084	0.585
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	91.931	0.585
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.507	0.579
recA	Streptococcus mitis NCTC 12261	61.92	93.084	0.576
recA	Streptococcus pyogenes NZ131	61.231	93.66	0.573
recA	Streptococcus mitis SK321	61.61	93.084	0.573
recA	Streptococcus mutans UA159	60.923	93.66	0.571
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.507	0.568
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.215	95.389	0.565
recA	Lactococcus lactis subsp. cremoris KW2	60.681	93.084	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	60.748	92.507	0.562