Detailed information NTG1009558

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABNG15_RS24330
• Genome accession: NZ_CP158022
• Coordinates: 5186405..5187742 (+)
• Length: 445 a.a.
• NCBI ID: WP_003094694.1
• Uniprot ID: A0A0H2ZG94
• Organism: Pseudomonas aeruginosa strain CI00795
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5181405..5192742

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNG15_RS24305 (ABNG15_24305)	pgeF	5181548..5182276 (-)	729	WP_003123393.1	peptidoglycan editing factor PgeF	-
ABNG15_RS24310 (ABNG15_24310)	rluD	5182273..5183235 (-)	963	WP_003094686.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ABNG15_RS24315 (ABNG15_24315)	-	5183381..5184406 (+)	1026	WP_003102590.1	outer membrane protein assembly factor BamD	-
ABNG15_RS24320 (ABNG15_24320)	-	5184563..5184808 (+)	246	WP_003102591.1	PP0621 family protein	-
ABNG15_RS24325 (ABNG15_24325)	pilS	5184798..5186390 (+)	1593	WP_367086485.1	two-component system sensor histidine kinase PilS	Regulator
ABNG15_RS24330 (ABNG15_24330)	pilR	5186405..5187742 (+)	1338	WP_003094694.1	two-component system response regulator PilR	Regulator
ABNG15_RS24335 (ABNG15_24335)	thiO	5187788..5188882 (-)	1095	WP_020750388.1	glycine oxidase ThiO	-
ABNG15_RS24340 (ABNG15_24340)	-	5189017..5189526 (+)	510	WP_003161431.1	Tfp pilus assembly protein FimT/FimU	-
ABNG15_RS24345 (ABNG15_24345)	-	5189632..5190138 (+)	507	WP_003102598.1	Tfp pilus assembly protein FimT/FimU	-
ABNG15_RS24350 (ABNG15_24350)	pilV	5190129..5190686 (+)	558	WP_003119423.1	type 4a pilus minor pilin PilV	Machinery gene
ABNG15_RS24355 (ABNG15_24355)	pilW	5190683..5191507 (+)	825	WP_003119422.1	type 4a pilus minor pilin PilW	-
ABNG15_RS24360 (ABNG15_24360)	pilX	5191504..5192091 (+)	588	WP_367086486.1	type 4a pilus minor pilin PilX	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49737.06 Da
• Isoelectric Point: 5.8654

>NTDB_id=1009558 ABNG15_RS24330 WP_003094694.1 5186405..5187742(+) (pilR) [Pseudomonas aeruginosa strain CI00795]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLAERI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=1009558 ABNG15_RS24330 WP_003094694.1 5186405..5187742(+) (pilR) [Pseudomonas aeruginosa strain CI00795]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAA
GCTGGACACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGCCGTTCGACCTGTGCCTCACCG
ACATGCGCCTGCCGGACGGCAGCGGCCTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATG
ATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGTGCCTTCGACTTCCTCACCAAACCGGTCGA
CCTCGGTCGCTTGCGGGAGCTGGTGGCAACCGCCCTGCGCTTGCGCAACCCGGAAGCCGAGGAAGCGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGTGGCGAGTCCGGTAGCGGCAAGGAGCTGGTGGCGCGCCTGATCCACGAGCAGGGGCCACGTATCGAGCGGCCGTT
CGTGCCGGTGAACTGCGGCGCGATTCCCTCCGAACTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACTG
GCGCTATCGAAGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGCGGCACTCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGGCCATGCAGGTCAAACTGCTCCGGGCGATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTCGCCGT
CGACGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAAGTCGGCGCCGGGCGCTTCCGCCAGGACCTCTACT
ACCGCCTCAACGTCATCGAGCTGCGCGTACCGCCGCTGCGCGAACGCCGCGAGGACATCCCGCTGCTCGCCGAACGCATC
CTCAAGCGCCTGGCCGGCGACACCGGCCTGCCGGCCGCCAGGCTGACCGGCGACGCACAGGAGAAGCTGAAGAACTACCG
CTTCCCGGGCAACGTCCGCGAGCTGGAAAACATGCTGGAGCGCGCCTACACCCTGTGCGAAGACGACCAGATCCAGCCTC
ACGACCTGCGCCTGGCCGATGCGCCGGGTGCCAGCCAGGAAGGCGCCGCGAGCCTGAGCGAAATAGACAACCTCGAGGAC
TACCTGGAAGACATCGAGCGCAAGCTGATCATGCAGGCGCTCGAGGAGACCCGCTGGAACCGCACCGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGCTCGATGCGCTACCGCCTGAAAAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

3D structure

• AlphaFold DB: A0A0H2ZG94

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	100	100	1
pilR	Acinetobacter baumannii strain A118	51.198	100	0.528
luxO	Vibrio cholerae strain A1552	38.17	100	0.384