Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | ABKA15_RS06455 | Genome accession | NZ_CP157941 |
| Coordinates | 1319284..1321437 (+) | Length | 717 a.a. |
| NCBI ID | WP_152907043.1 | Uniprot ID | - |
| Organism | Streptococcus sp. KHUD_010 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| IS/Tn | 1318175..1319194 | 1319284..1321437 | flank | 90 |
Gene organization within MGE regions
Location: 1318175..1321437
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABKA15_RS06450 (ABKA15_06445) | - | 1318175..1319194 (+) | 1020 | WP_192208547.1 | IS30 family transposase | - |
| ABKA15_RS06455 (ABKA15_06450) | comA/nlmT | 1319284..1321437 (+) | 2154 | WP_152907043.1 | peptide cleavage/export ABC transporter | Regulator |
Sequence
Protein
Download Length: 717 a.a. Molecular weight: 80665.21 Da Isoelectric Point: 9.5123
>NTDB_id=1009125 ABKA15_RS06455 WP_152907043.1 1319284..1321437(+) (comA/nlmT) [Streptococcus sp. KHUD_010]
MVNFKKSFVPQIDARDCGIAALASIARYYGSNYSLAHLRELAKTDKEGTTALGIVKAAKEMGFETRPIQADMTLFDTEEL
PYPFIVHINKNGNLQHYYVVYKNEKKHLLIGDPDPTVKITKISKEQFAKDWTGVAIFLAPKPSYKPYKDKKDGLVSLLPL
IFKQRSLIFYIVLASLIVTLINIVGSYYLQGVLDEYIPNRMKSTLGIISIGLIIAYILQQMMSFSRDYLLTVLSQRLTID
VILSYIRHIFELPMSFFATRRTGEIISRFTDANSIIDALASTILSLFLDLSIVMIVGSVLLLQNANLFLLTLLAIPIYAL
IIFAFMKPFEKMNNDVMQSNAMINSAIIEDINGIETIKSLTSEESRYQKIDSEFVDYLDKTFKLSKYSIMQTALKQGAQF
ILNVIILWFGASLVMSQKISIGQLITFNALLSYFTSPLESIINLQTKLQSAKVANHRLNEVYLVESEFKTKQVLTEKRFL
AGDITFHNVSYKYGFGRDTLSDISLTIKKGDKISLVGISGSGKTTLAKMIVHFYEPYQGQIRLNGNDLKTIDRKVLRQYI
NYLPQQAYIFSGSILENLTLGANQAVSQSDILRACEIAEIRSDIEQMPLGYQTELSDGAGLSGGQKQRIALARALLTKSP
ILILDEATSGLDVLTEKKVIDNLMKLPDKTIIFVAHRLSISKRTNQIIVLDQGKVIETGSHTELIGRKGFYYHLFNK
MVNFKKSFVPQIDARDCGIAALASIARYYGSNYSLAHLRELAKTDKEGTTALGIVKAAKEMGFETRPIQADMTLFDTEEL
PYPFIVHINKNGNLQHYYVVYKNEKKHLLIGDPDPTVKITKISKEQFAKDWTGVAIFLAPKPSYKPYKDKKDGLVSLLPL
IFKQRSLIFYIVLASLIVTLINIVGSYYLQGVLDEYIPNRMKSTLGIISIGLIIAYILQQMMSFSRDYLLTVLSQRLTID
VILSYIRHIFELPMSFFATRRTGEIISRFTDANSIIDALASTILSLFLDLSIVMIVGSVLLLQNANLFLLTLLAIPIYAL
IIFAFMKPFEKMNNDVMQSNAMINSAIIEDINGIETIKSLTSEESRYQKIDSEFVDYLDKTFKLSKYSIMQTALKQGAQF
ILNVIILWFGASLVMSQKISIGQLITFNALLSYFTSPLESIINLQTKLQSAKVANHRLNEVYLVESEFKTKQVLTEKRFL
AGDITFHNVSYKYGFGRDTLSDISLTIKKGDKISLVGISGSGKTTLAKMIVHFYEPYQGQIRLNGNDLKTIDRKVLRQYI
NYLPQQAYIFSGSILENLTLGANQAVSQSDILRACEIAEIRSDIEQMPLGYQTELSDGAGLSGGQKQRIALARALLTKSP
ILILDEATSGLDVLTEKKVIDNLMKLPDKTIIFVAHRLSISKRTNQIIVLDQGKVIETGSHTELIGRKGFYYHLFNK
Nucleotide
Download Length: 2154 bp
>NTDB_id=1009125 ABKA15_RS06455 WP_152907043.1 1319284..1321437(+) (comA/nlmT) [Streptococcus sp. KHUD_010]
ATAGTGAATTTTAAAAAATCGTTTGTGCCGCAAATAGATGCTAGAGATTGTGGTATTGCTGCTCTGGCTTCCATTGCTAG
ATACTATGGTTCAAATTATTCTTTAGCACACTTGAGAGAGCTCGCAAAGACAGACAAAGAAGGGACAACTGCACTTGGAA
TTGTCAAAGCAGCAAAAGAAATGGGCTTTGAAACCCGACCAATCCAAGCAGATATGACATTGTTTGATACAGAAGAGCTT
CCCTATCCTTTCATCGTACATATCAATAAAAACGGCAACCTTCAGCACTATTATGTCGTTTATAAAAACGAGAAAAAGCA
TTTGCTTATCGGTGATCCTGATCCAACTGTCAAAATAACTAAAATTAGCAAAGAACAATTTGCAAAAGATTGGACTGGTG
TTGCTATCTTTCTCGCACCGAAACCTAGCTATAAACCTTATAAGGATAAGAAGGACGGGCTTGTTAGCCTTTTACCACTC
ATCTTTAAACAGCGTTCTTTGATTTTTTATATTGTCTTAGCTAGTTTGATCGTGACCCTCATCAACATTGTGGGCTCCTA
TTATCTGCAAGGTGTTTTGGACGAATACATCCCAAATCGGATGAAATCAACTCTTGGGATTATTTCAATTGGGCTTATCA
TTGCCTACATCTTACAGCAAATGATGAGTTTTTCAAGAGACTACCTGCTAACAGTGCTCAGTCAACGATTAACAATTGAT
GTGATTTTGTCTTATATTCGGCATATTTTTGAATTACCAATGTCCTTTTTTGCGACGAGACGCACTGGGGAGATTATTTC
TCGTTTTACAGATGCCAACTCCATTATTGATGCTCTAGCTTCAACTATCCTGTCTCTCTTTCTTGATTTGTCCATTGTGA
TGATTGTCGGCAGTGTTCTTTTACTGCAAAACGCCAATCTCTTTTTACTCACCTTGCTTGCAATTCCTATCTACGCTCTC
ATTATTTTTGCTTTTATGAAGCCTTTTGAAAAAATGAACAACGATGTTATGCAAAGCAATGCTATGATAAATTCTGCCAT
TATCGAAGATATCAATGGAATTGAAACCATTAAATCCTTAACCAGCGAAGAAAGTCGTTACCAGAAGATTGATAGCGAGT
TTGTTGATTATCTGGATAAGACTTTCAAGTTAAGTAAATATTCTATTATGCAGACAGCACTCAAACAAGGAGCACAATTT
ATTTTGAATGTGATCATTCTCTGGTTTGGAGCTTCTTTAGTCATGTCTCAAAAAATTTCGATTGGGCAATTGATTACTTT
CAATGCACTCCTTTCGTATTTCACAAGTCCACTTGAAAGTATCATCAATCTTCAAACCAAACTGCAATCAGCCAAAGTTG
CCAATCATCGACTGAATGAAGTTTATCTGGTAGAATCTGAATTCAAAACCAAGCAAGTCCTTACGGAAAAAAGATTCTTA
GCTGGAGACATTACTTTCCATAACGTTTCCTATAAATACGGCTTTGGACGAGATACTTTATCAGATATTAGTTTGACTAT
CAAGAAGGGAGATAAAATTAGTCTTGTCGGCATCAGTGGTTCGGGCAAAACAACACTTGCTAAGATGATTGTTCATTTTT
ATGAGCCTTATCAAGGGCAAATCCGCCTCAATGGAAATGACCTCAAGACAATTGACAGGAAAGTTCTTCGTCAATACATC
AATTATCTACCTCAGCAAGCTTACATCTTTAGCGGATCCATTCTAGAAAACCTCACATTAGGAGCCAATCAAGCAGTTTC
TCAATCAGACATTCTTCGTGCTTGTGAAATTGCAGAAATCCGCTCAGACATTGAACAAATGCCTCTGGGATACCAGACAG
AATTGTCTGACGGAGCTGGATTATCTGGTGGACAAAAGCAACGAATTGCACTTGCACGCGCTCTGCTGACGAAATCTCCC
ATTCTCATTTTAGATGAAGCAACGAGTGGATTAGATGTTTTAACAGAGAAAAAAGTCATTGATAATCTCATGAAATTACC
CGACAAAACCATTATTTTTGTTGCTCATCGTCTCAGCATCTCAAAGCGTACAAATCAGATTATTGTCCTCGACCAAGGAA
AAGTGATTGAAACTGGTTCTCATACTGAATTGATAGGAAGAAAAGGTTTTTATTATCATCTATTTAATAAATAA
ATAGTGAATTTTAAAAAATCGTTTGTGCCGCAAATAGATGCTAGAGATTGTGGTATTGCTGCTCTGGCTTCCATTGCTAG
ATACTATGGTTCAAATTATTCTTTAGCACACTTGAGAGAGCTCGCAAAGACAGACAAAGAAGGGACAACTGCACTTGGAA
TTGTCAAAGCAGCAAAAGAAATGGGCTTTGAAACCCGACCAATCCAAGCAGATATGACATTGTTTGATACAGAAGAGCTT
CCCTATCCTTTCATCGTACATATCAATAAAAACGGCAACCTTCAGCACTATTATGTCGTTTATAAAAACGAGAAAAAGCA
TTTGCTTATCGGTGATCCTGATCCAACTGTCAAAATAACTAAAATTAGCAAAGAACAATTTGCAAAAGATTGGACTGGTG
TTGCTATCTTTCTCGCACCGAAACCTAGCTATAAACCTTATAAGGATAAGAAGGACGGGCTTGTTAGCCTTTTACCACTC
ATCTTTAAACAGCGTTCTTTGATTTTTTATATTGTCTTAGCTAGTTTGATCGTGACCCTCATCAACATTGTGGGCTCCTA
TTATCTGCAAGGTGTTTTGGACGAATACATCCCAAATCGGATGAAATCAACTCTTGGGATTATTTCAATTGGGCTTATCA
TTGCCTACATCTTACAGCAAATGATGAGTTTTTCAAGAGACTACCTGCTAACAGTGCTCAGTCAACGATTAACAATTGAT
GTGATTTTGTCTTATATTCGGCATATTTTTGAATTACCAATGTCCTTTTTTGCGACGAGACGCACTGGGGAGATTATTTC
TCGTTTTACAGATGCCAACTCCATTATTGATGCTCTAGCTTCAACTATCCTGTCTCTCTTTCTTGATTTGTCCATTGTGA
TGATTGTCGGCAGTGTTCTTTTACTGCAAAACGCCAATCTCTTTTTACTCACCTTGCTTGCAATTCCTATCTACGCTCTC
ATTATTTTTGCTTTTATGAAGCCTTTTGAAAAAATGAACAACGATGTTATGCAAAGCAATGCTATGATAAATTCTGCCAT
TATCGAAGATATCAATGGAATTGAAACCATTAAATCCTTAACCAGCGAAGAAAGTCGTTACCAGAAGATTGATAGCGAGT
TTGTTGATTATCTGGATAAGACTTTCAAGTTAAGTAAATATTCTATTATGCAGACAGCACTCAAACAAGGAGCACAATTT
ATTTTGAATGTGATCATTCTCTGGTTTGGAGCTTCTTTAGTCATGTCTCAAAAAATTTCGATTGGGCAATTGATTACTTT
CAATGCACTCCTTTCGTATTTCACAAGTCCACTTGAAAGTATCATCAATCTTCAAACCAAACTGCAATCAGCCAAAGTTG
CCAATCATCGACTGAATGAAGTTTATCTGGTAGAATCTGAATTCAAAACCAAGCAAGTCCTTACGGAAAAAAGATTCTTA
GCTGGAGACATTACTTTCCATAACGTTTCCTATAAATACGGCTTTGGACGAGATACTTTATCAGATATTAGTTTGACTAT
CAAGAAGGGAGATAAAATTAGTCTTGTCGGCATCAGTGGTTCGGGCAAAACAACACTTGCTAAGATGATTGTTCATTTTT
ATGAGCCTTATCAAGGGCAAATCCGCCTCAATGGAAATGACCTCAAGACAATTGACAGGAAAGTTCTTCGTCAATACATC
AATTATCTACCTCAGCAAGCTTACATCTTTAGCGGATCCATTCTAGAAAACCTCACATTAGGAGCCAATCAAGCAGTTTC
TCAATCAGACATTCTTCGTGCTTGTGAAATTGCAGAAATCCGCTCAGACATTGAACAAATGCCTCTGGGATACCAGACAG
AATTGTCTGACGGAGCTGGATTATCTGGTGGACAAAAGCAACGAATTGCACTTGCACGCGCTCTGCTGACGAAATCTCCC
ATTCTCATTTTAGATGAAGCAACGAGTGGATTAGATGTTTTAACAGAGAAAAAAGTCATTGATAATCTCATGAAATTACC
CGACAAAACCATTATTTTTGTTGCTCATCGTCTCAGCATCTCAAAGCGTACAAATCAGATTATTGTCCTCGACCAAGGAA
AAGTGATTGAAACTGGTTCTCATACTGAATTGATAGGAAGAAAAGGTTTTTATTATCATCTATTTAATAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
72.073 |
98.884 |
0.713 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
66.339 |
99.442 |
0.66 |
| comA | Streptococcus mitis NCTC 12261 |
66.339 |
99.442 |
0.66 |
| comA | Streptococcus mitis SK321 |
66.199 |
99.442 |
0.658 |
| comA | Streptococcus pneumoniae D39 |
65.638 |
99.442 |
0.653 |
| comA | Streptococcus pneumoniae Rx1 |
65.638 |
99.442 |
0.653 |
| comA | Streptococcus pneumoniae R6 |
65.638 |
99.442 |
0.653 |
| comA | Streptococcus pneumoniae TIGR4 |
65.217 |
99.442 |
0.649 |