Detailed information NTG1008364

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABNF92_RS06905
• Genome accession: NZ_CP157802
• Coordinates: 1495284..1496345 (-)
• Length: 353 a.a.
• NCBI ID: WP_349343800.1
• Uniprot ID: A0AAU7MTW4
• Organism: Marinobacter sp. MMG032
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1490284..1501345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNF92_RS06880 (ABNF92_06880)	aroK	1490721..1491287 (-)	567	WP_222466555.1	shikimate kinase AroK	-
ABNF92_RS06885 (ABNF92_06885)	pilQ	1491424..1493493 (-)	2070	WP_349344067.1	type IV pilus secretin PilQ	Machinery gene
ABNF92_RS06890 (ABNF92_06890)	-	1493559..1494107 (-)	549	WP_349343797.1	pilus assembly protein PilP	-
ABNF92_RS06895 (ABNF92_06895)	-	1494110..1494721 (-)	612	WP_349343798.1	type 4a pilus biogenesis protein PilO	-
ABNF92_RS06900 (ABNF92_06900)	-	1494721..1495284 (-)	564	WP_349343799.1	PilN domain-containing protein	-
ABNF92_RS06905 (ABNF92_06905)	pilM	1495284..1496345 (-)	1062	WP_349343800.1	pilus assembly protein PilM	Machinery gene
ABNF92_RS06910 (ABNF92_06910)	-	1496541..1499069 (+)	2529	WP_349343801.1	penicillin-binding protein 1A	-
ABNF92_RS06915 (ABNF92_06915)	-	1499137..1500402 (-)	1266	WP_349343802.1	malic enzyme-like NAD(P)-binding protein	-
ABNF92_RS06920 (ABNF92_06920)	rpmE	1500631..1500852 (-)	222	WP_064230272.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37803.83 Da
• Isoelectric Point: 4.1243

>NTDB_id=1008364 ABNF92_RS06905 WP_349343800.1 1495284..1496345(-) (pilM) [Marinobacter sp. MMG032]
MFGLGKKSSAVLGVDISSSSVKLLELSKQGDRYKVESYAVEPLPANAVVEKNITDVEAVGEVMKRVASKSRSGVKQVAVA
VSGSAVITKVIQMDGGLNEFEMEDQIALEADQYIPYPLDEVAIDFEVQGPSESNPDQVDVLLAACRKENVDIREDALEIA
SLTTKVVDVEAYALERAYALIEPQLDSQGEELVVAIVDIGATMTTLSVLADGKTVYTREQIFGGKQLTEEIQRRYGLSLE
EAGLAKKQGGLPDDYESEVLTPFREAVVQQVARALQFFFGASQYNTVDYVVLAGGTASIPGLTEMVEEKTGTPALVANPF
ADMAVGSRVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1062 bp

>NTDB_id=1008364 ABNF92_RS06905 WP_349343800.1 1495284..1496345(-) (pilM) [Marinobacter sp. MMG032]
GTGTTTGGATTAGGAAAGAAATCCAGTGCAGTGCTGGGCGTGGATATAAGCTCCAGCTCGGTCAAACTTCTGGAGCTGTC
GAAGCAGGGCGACCGGTATAAGGTCGAGAGCTACGCGGTTGAGCCTTTGCCGGCCAATGCCGTGGTGGAAAAGAACATTA
CCGACGTCGAAGCCGTGGGCGAAGTGATGAAGCGCGTGGCTTCAAAGTCCCGTTCCGGCGTAAAGCAGGTAGCAGTTGCG
GTATCAGGTTCGGCGGTAATCACCAAGGTCATCCAAATGGATGGTGGCCTCAACGAATTCGAGATGGAAGATCAGATTGC
CCTCGAGGCCGATCAGTATATTCCATACCCGCTGGATGAAGTGGCCATTGATTTCGAAGTTCAGGGACCTTCCGAAAGTA
ATCCCGATCAGGTAGATGTGCTTCTGGCAGCATGCCGAAAGGAAAATGTCGACATTCGGGAAGATGCACTCGAGATTGCT
TCACTCACCACCAAGGTGGTTGATGTTGAGGCCTATGCCCTTGAACGCGCCTATGCATTGATTGAGCCTCAATTGGACTC
GCAGGGTGAAGAGCTGGTGGTGGCGATTGTGGACATCGGTGCAACAATGACCACATTGAGCGTTCTGGCCGATGGAAAGA
CTGTCTATACTCGCGAGCAGATTTTTGGTGGAAAGCAGCTGACCGAGGAAATTCAGCGCAGGTACGGCTTATCTCTCGAA
GAGGCCGGTCTTGCTAAAAAGCAGGGCGGATTGCCTGATGATTACGAGTCTGAAGTGCTTACTCCCTTTCGAGAAGCTGT
AGTGCAACAGGTTGCTCGAGCACTTCAGTTCTTCTTTGGTGCTAGTCAGTACAACACTGTTGATTATGTGGTTCTGGCTG
GAGGAACTGCCTCAATTCCGGGGCTGACGGAGATGGTTGAAGAGAAAACAGGTACACCGGCGCTGGTTGCCAACCCGTTT
GCGGACATGGCTGTAGGGTCCAGGGTCAACGCATCGGCACTGAGTAATGATGCGCCATCGTTAATGATTGCCTGCGGCTT
GGCAATGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	54.31	98.584	0.535
comM	Acinetobacter nosocomialis M2	54.31	98.584	0.535
comM	Acinetobacter baylyi ADP1	51.724	98.584	0.51
pilM	Legionella pneumophila strain ERS1305867	46.286	99.15	0.459