Detailed information NTG0100825

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: QUD79_RS16700
• Genome accession: NZ_AP027362
• Coordinates: 3748806..3750329 (+)
• Length: 507 a.a.
• NCBI ID: WP_184423340.1
• Uniprot ID: A0A7X0TSW1
• Organism: Thalassotalea piscium strain JCM 18590
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 3743806..3755329

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUD79_RS16685	-	3745373..3746299 (-)	927	WP_184423334.1	branched-chain amino acid transaminase	-
QUD79_RS16690	ilvM	3746401..3746658 (-)	258	WP_184423336.1	acetolactate synthase 2 small subunit	-
QUD79_RS16695	ilvG	3746660..3748324 (-)	1665	WP_184423338.1	acetolactate synthase 2 catalytic subunit	-
QUD79_RS16700	comM	3748806..3750329 (+)	1524	WP_184423340.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
QUD79_RS16705	ilvY	3750339..3751226 (-)	888	WP_184423342.1	HTH-type transcriptional activator IlvY	-
QUD79_RS16710	ilvC	3751382..3752857 (+)	1476	WP_184423344.1	ketol-acid reductoisomerase	-
QUD79_RS16715	-	3752974..3754245 (-)	1272	WP_281401810.1	glutamate-5-semialdehyde dehydrogenase	-

Sequence

Protein

• Length: 507 a.a.
• Molecular weight: 55149.08 Da
• Isoelectric Point: 6.8834

>NTDB_id=100825 QUD79_RS16700 WP_184423340.1 3748806..3750329(+) (comM) [Thalassotalea piscium strain JCM 18590]
MSLACVYSRARVGLTAPLVTVEVHLANGLPAFNIVGLPETSVREAKDRVRSAIINCGYEFPAKRITINLAPADLPKEGGR
FDLPIAVGILAASAQIPTEELSQYEFAGELALSGALREVIGEIPMAMACSENERTLIIPQDNAEQASWVKSAKIYAISHL
SELYPHLLHQQALPLALAVEHVEQSIDSNNDIADVIGQPMAKRALEIAASGAHNLLFIGPPGTGKTMLASRLPGILPQMT
ESQALEVASIQSICHHSISASSWLTRPFRAPHHTASAAALVGGGSQPQPGEVSLAHHGVLFLDELPEFERKVLDVLREPL
ESGEVTISRALHKQTFPAQFQLVAAMNPSPTGFYNDNRSTPEQVLRYLNRLSGPFLDRIDIQIEVTRLPKGSWANNSGKG
ETSAKIRARVQQCASIQQKRQGKANAHLSSAEIRQYCKLSADDNEFLELAVEKLGLSTRAHHKLLKIARTLADMEQAENI
ANQHLVEALSYRAMDRILRHLTNAVAV

Nucleotide

• Length: 1524 bp

>NTDB_id=100825 QUD79_RS16700 WP_184423340.1 3748806..3750329(+) (comM) [Thalassotalea piscium strain JCM 18590]
ATGTCTCTTGCTTGCGTTTACAGTAGAGCCCGCGTTGGTTTAACTGCCCCTCTTGTTACGGTTGAAGTACATTTAGCGAA
TGGTTTACCCGCATTTAATATTGTTGGGCTACCTGAAACCTCAGTACGTGAAGCCAAAGATCGGGTACGAAGTGCAATAA
TTAATTGTGGTTATGAATTTCCTGCAAAGCGTATCACAATAAATTTAGCACCCGCTGATTTACCCAAAGAAGGCGGACGT
TTTGATCTCCCTATCGCAGTTGGCATTTTAGCTGCCTCGGCACAAATACCTACCGAAGAGCTTTCTCAATATGAATTTGC
GGGCGAACTTGCCTTATCAGGTGCCTTACGCGAAGTTATTGGAGAGATCCCAATGGCAATGGCCTGTAGTGAAAATGAAA
GAACGTTAATTATTCCTCAAGACAATGCCGAGCAGGCAAGTTGGGTAAAATCTGCAAAAATTTATGCAATTTCTCATTTA
AGTGAGTTATATCCACACCTATTACACCAACAAGCATTGCCATTAGCTCTTGCTGTAGAGCATGTTGAACAAAGCATAGA
CAGTAATAACGATATTGCAGATGTTATTGGCCAACCAATGGCAAAACGTGCGTTAGAAATTGCAGCGAGTGGCGCGCACA
ATTTATTATTTATTGGGCCTCCCGGCACAGGAAAAACCATGCTTGCGAGTAGGTTACCAGGTATTTTACCACAAATGACT
GAATCTCAAGCGTTAGAAGTCGCCTCTATTCAATCAATTTGTCATCATTCAATTAGCGCTAGCTCTTGGCTAACTCGCCC
ATTTAGAGCACCGCACCATACCGCCTCTGCCGCAGCATTAGTAGGTGGAGGTAGTCAACCTCAACCCGGTGAAGTATCAC
TAGCTCACCATGGCGTGTTGTTTTTAGATGAATTACCCGAATTTGAACGCAAAGTACTAGATGTATTGCGCGAACCTCTT
GAGTCGGGAGAAGTTACTATCTCTAGGGCATTACACAAACAAACATTTCCTGCACAATTTCAGTTAGTGGCGGCAATGAA
TCCTAGCCCTACAGGTTTTTATAATGATAACCGCAGCACACCTGAGCAAGTGCTACGTTATCTTAATCGTTTATCTGGGC
CTTTTCTTGATCGCATAGATATTCAAATTGAAGTGACACGCTTACCCAAAGGTTCTTGGGCTAACAATTCTGGCAAAGGG
GAAACAAGTGCTAAAATTCGTGCCCGAGTACAACAATGTGCATCGATACAACAAAAGCGCCAAGGCAAAGCAAATGCTCA
TTTAAGTAGTGCCGAAATACGTCAGTACTGCAAATTAAGCGCTGATGACAATGAGTTTCTAGAGCTTGCCGTTGAAAAGC
TTGGCCTATCAACCCGTGCCCATCATAAGTTATTAAAAATTGCACGTACACTTGCCGACATGGAGCAAGCTGAGAACATT
GCTAATCAACATTTAGTAGAAGCGCTTTCGTACCGTGCAATGGATAGAATATTACGCCATTTAACCAATGCGGTAGCCGT
GTAA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-390)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

3D structure

• AlphaFold DB: A0A7X0TSW1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	58.858	100	0.59
comM	Vibrio cholerae strain A1552	58.135	99.408	0.578
comM	Glaesserella parasuis strain SC1401	57.367	100	0.576
comM	Vibrio campbellii strain DS40M4	56.944	99.408	0.566
comM	Legionella pneumophila str. Paris	48.708	99.211	0.483
comM	Legionella pneumophila strain ERS1305867	48.708	99.211	0.483
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.063	100	0.462