Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   ABKJ27_RS07700 Genome accession   NZ_CP157578
Coordinates   1598056..1598793 (-) Length   245 a.a.
NCBI ID   WP_410011634.1    Uniprot ID   -
Organism   Streptococcus sp. KHUD_011     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1593056..1603793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKJ27_RS07660 (ABKJ27_07675) - 1593164..1593853 (-) 690 WP_410011629.1 CPBP family intramembrane glutamic endopeptidase -
  ABKJ27_RS07665 (ABKJ27_07680) - 1593882..1594202 (-) 321 WP_000645118.1 hypothetical protein -
  ABKJ27_RS07670 (ABKJ27_07685) - 1594217..1594444 (-) 228 WP_410011630.1 ComC/BlpC family peptide pheromone/bacteriocin -
  ABKJ27_RS07675 (ABKJ27_07690) - 1594465..1594650 (-) 186 WP_410012148.1 hypothetical protein -
  ABKJ27_RS07680 (ABKJ27_07695) - 1595012..1595416 (-) 405 WP_410011631.1 immunity protein -
  ABKJ27_RS07685 (ABKJ27_07700) - 1595869..1595988 (-) 120 WP_410011632.1 PncF family bacteriocin immunity protein -
  ABKJ27_RS07690 - 1596268..1596459 (-) 192 WP_247932365.1 hypothetical protein -
  ABKJ27_RS07695 (ABKJ27_07710) - 1596693..1598042 (-) 1350 WP_410011633.1 sensor histidine kinase -
  ABKJ27_RS07700 (ABKJ27_07715) comE/blpR 1598056..1598793 (-) 738 WP_410011634.1 response regulator transcription factor Regulator
  ABKJ27_RS07705 (ABKJ27_07720) - 1599089..1599418 (+) 330 WP_084947397.1 helicase BlpT -
  ABKJ27_RS07710 (ABKJ27_07725) - 1599480..1600529 (-) 1050 WP_410011635.1 ABC transporter permease -
  ABKJ27_RS07715 (ABKJ27_07730) pptA 1600526..1601257 (-) 732 WP_000889954.1 ABC transporter ATP-binding protein Regulator
  ABKJ27_RS07720 (ABKJ27_07735) - 1601325..1601735 (+) 411 WP_410011636.1 HIT family protein -
  ABKJ27_RS07725 (ABKJ27_07740) - 1601745..1602032 (+) 288 WP_410011637.1 hypothetical protein -
  ABKJ27_RS07730 (ABKJ27_07745) dnaJ 1602321..1603457 (-) 1137 WP_001066308.1 molecular chaperone DnaJ -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28726.90 Da        Isoelectric Point: 6.3923

>NTDB_id=1007474 ABKJ27_RS07700 WP_410011634.1 1598056..1598793(-) (comE/blpR) [Streptococcus sp. KHUD_011]
MRIFVLEDDFSQQTRIEATIEKLLKEHQITPSSFAVFGKPDQLLAEVHEKGAHQLFFLDIEIRNEEMKGLEVARKIRDRD
PYALIVFVTTHSEFMPLSFRYQVSALDYIDKALSAEEFESRIETALLYANSQDSKSLAEDCFYFKSKFAQFQYPFKEVYY
LETSPRAHRVILYTKTDRLEFTASLEEVFKQEPRLLQCHRSFLINPANVVRLDKKEKLLFFPNGGSCMIARYKVREVSEA
INNLH

Nucleotide


Download         Length: 738 bp        

>NTDB_id=1007474 ABKJ27_RS07700 WP_410011634.1 1598056..1598793(-) (comE/blpR) [Streptococcus sp. KHUD_011]
ATGAGAATATTTGTTTTAGAAGATGATTTTTCCCAGCAGACTAGGATTGAAGCGACGATTGAGAAACTCTTGAAGGAACA
TCAGATCACTCCCAGTTCTTTTGCGGTCTTTGGTAAGCCAGATCAACTGCTGGCAGAGGTGCATGAGAAGGGAGCCCATC
AGCTATTCTTTTTGGATATTGAGATTCGAAATGAGGAGATGAAGGGGCTAGAAGTGGCTAGAAAGATTCGGGATCGAGAT
CCCTATGCCCTGATTGTCTTTGTGACAACTCACTCGGAGTTTATGCCCCTGTCCTTTCGCTACCAAGTGTCTGCTTTGGA
CTACATTGATAAGGCCTTGTCGGCAGAGGAGTTTGAATCTCGTATCGAAACAGCCCTTCTCTATGCCAATAGTCAAGACA
GTAAAAGTCTGGCGGAAGATTGCTTTTACTTTAAATCAAAATTTGCCCAATTCCAGTATCCTTTTAAAGAGGTTTATTAT
CTTGAAACATCGCCCAGAGCTCATCGTGTTATTCTCTATACCAAGACAGACAGACTGGAATTTACAGCCAGTTTAGAGGA
GGTTTTCAAGCAGGAACCCCGTCTCTTGCAGTGCCATCGCTCTTTTCTCATTAATCCTGCCAATGTAGTTCGTTTGGATA
AGAAAGAAAAACTCCTTTTCTTTCCTAATGGCGGAAGCTGTATGATTGCGCGTTATAAGGTCAGAGAAGTGTCTGAAGCT
ATTAATAACTTACACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

54.321

99.184

0.539

  comE/comE1 Streptococcus equinus JB1

42.616

96.735

0.412

  comE/comE2 Streptococcus equinus JB1

39.256

98.776

0.388

  comE Streptococcus infantis strain Atu-4

36.179

100

0.363


Multiple sequence alignment