Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ABKJ27_RS07715 Genome accession   NZ_CP157578
Coordinates   1600526..1601257 (-) Length   243 a.a.
NCBI ID   WP_000889954.1    Uniprot ID   F9HLZ7
Organism   Streptococcus sp. KHUD_011     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1595526..1606257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKJ27_RS07685 (ABKJ27_07700) - 1595869..1595988 (-) 120 WP_410011632.1 PncF family bacteriocin immunity protein -
  ABKJ27_RS07690 - 1596268..1596459 (-) 192 WP_247932365.1 hypothetical protein -
  ABKJ27_RS07695 (ABKJ27_07710) - 1596693..1598042 (-) 1350 WP_410011633.1 sensor histidine kinase -
  ABKJ27_RS07700 (ABKJ27_07715) comE/blpR 1598056..1598793 (-) 738 WP_410011634.1 response regulator transcription factor Regulator
  ABKJ27_RS07705 (ABKJ27_07720) - 1599089..1599418 (+) 330 WP_084947397.1 helicase BlpT -
  ABKJ27_RS07710 (ABKJ27_07725) - 1599480..1600529 (-) 1050 WP_410011635.1 ABC transporter permease -
  ABKJ27_RS07715 (ABKJ27_07730) pptA 1600526..1601257 (-) 732 WP_000889954.1 ABC transporter ATP-binding protein Regulator
  ABKJ27_RS07720 (ABKJ27_07735) - 1601325..1601735 (+) 411 WP_410011636.1 HIT family protein -
  ABKJ27_RS07725 (ABKJ27_07740) - 1601745..1602032 (+) 288 WP_410011637.1 hypothetical protein -
  ABKJ27_RS07730 (ABKJ27_07745) dnaJ 1602321..1603457 (-) 1137 WP_001066308.1 molecular chaperone DnaJ -
  ABKJ27_RS07735 (ABKJ27_07750) dnaK 1603932..1605755 (-) 1824 WP_410011638.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27098.58 Da        Isoelectric Point: 4.6989

>NTDB_id=1007475 ABKJ27_RS07715 WP_000889954.1 1600526..1601257(-) (pptA) [Streptococcus sp. KHUD_011]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGSININGLTLQEDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFDRVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1007475 ABKJ27_RS07715 WP_000889954.1 1600526..1601257(-) (pptA) [Streptococcus sp. KHUD_011]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTCCCTGTCTTGAAAGATGTGTCCTTTACAGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAAATTATCGGTCTGTTGACACCCT
ATAGTGGCTCCATCAATATCAATGGCCTGACCCTGCAAGAAGATGCAACGAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACACCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCCATGGCTTATGGTATTGAGCAGAA
AGTGGCTTTTGATCGAGTAGAGCCCTTGTTAAAAATGTTTCGCTTGGACCAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAAGTCATGATTATCTGTGCTTTTGTGGTGGATCCGAGTCTTTTCATCGTGGATGAGCCTTTC
CTTGGGCTCGATCCGTTGGCTATTGCAGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAGGGCAAGTCCATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTCCACAAGGGTGAGGTGCGTGCTAAGG
GGAATCTCCTGCAACTGCGCGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9HLZ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712

Multiple sequence alignment