Detailed information NTG1007121

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABLD69_RS07615
• Genome accession: NZ_CP157480
• Coordinates: 1623921..1624622 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2024CK-00461
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1618921..1629622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLD69_RS07580 (ABLD69_07575)	kdsB	1619444..1620205 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ABLD69_RS07585 (ABLD69_07580)	-	1620217..1621197 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABLD69_RS07590 (ABLD69_07585)	-	1621209..1621550 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ABLD69_RS07595 (ABLD69_07590)	-	1621568..1622341 (+)	774	WP_000497298.1	TatD family hydrolase	-
ABLD69_RS07600 (ABLD69_07595)	-	1622379..1622987 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABLD69_RS07605 (ABLD69_07600)	-	1622997..1623551 (+)	555	WP_000841373.1	type II secretion system protein	-
ABLD69_RS07610 (ABLD69_07605)	xcpV	1623541..1623921 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABLD69_RS07615 (ABLD69_07610)	xcpW	1623921..1624622 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABLD69_RS07620 (ABLD69_07615)	gspK	1624622..1625581 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABLD69_RS07625 (ABLD69_07620)	-	1625812..1626408 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABLD69_RS07630 (ABLD69_07625)	ung	1626459..1627172 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABLD69_RS07635 (ABLD69_07630)	-	1627169..1628293 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABLD69_RS07640 (ABLD69_07635)	tadA	1628300..1628803 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABLD69_RS07645 (ABLD69_07640)	-	1628873..1629316 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1007121 ABLD69_RS07615 WP_000594589.1 1623921..1624622(+) (xcpW) [Acinetobacter baumannii strain 2024CK-00461]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1007121 ABLD69_RS07615 WP_000594589.1 1623921..1624622(+) (xcpW) [Acinetobacter baumannii strain 2024CK-00461]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996