Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABLD69_RS07610 | Genome accession | NZ_CP157480 |
| Coordinates | 1623541..1623921 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 2024CK-00461 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1618541..1628921
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABLD69_RS07580 (ABLD69_07575) | kdsB | 1619444..1620205 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ABLD69_RS07585 (ABLD69_07580) | - | 1620217..1621197 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ABLD69_RS07590 (ABLD69_07585) | - | 1621209..1621550 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABLD69_RS07595 (ABLD69_07590) | - | 1621568..1622341 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ABLD69_RS07600 (ABLD69_07595) | - | 1622379..1622987 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABLD69_RS07605 (ABLD69_07600) | - | 1622997..1623551 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABLD69_RS07610 (ABLD69_07605) | xcpV | 1623541..1623921 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABLD69_RS07615 (ABLD69_07610) | xcpW | 1623921..1624622 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABLD69_RS07620 (ABLD69_07615) | gspK | 1624622..1625581 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ABLD69_RS07625 (ABLD69_07620) | - | 1625812..1626408 (+) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ABLD69_RS07630 (ABLD69_07625) | ung | 1626459..1627172 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ABLD69_RS07635 (ABLD69_07630) | - | 1627169..1628293 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABLD69_RS07640 (ABLD69_07635) | tadA | 1628300..1628803 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1007120 ABLD69_RS07610 WP_000836911.1 1623541..1623921(+) (xcpV) [Acinetobacter baumannii strain 2024CK-00461]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1007120 ABLD69_RS07610 WP_000836911.1 1623541..1623921(+) (xcpV) [Acinetobacter baumannii strain 2024CK-00461]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |