Detailed information NTG1006449

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: ABKP85_RS03430
• Genome accession: NZ_CP157379
• Coordinates: 651092..651739 (+)
• Length: 215 a.a.
• NCBI ID: WP_231097785.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain NZ3900
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	644106..654922	651092..651739	within	0
IScluster/Tn	644518..654248	651092..651739	within	0

Gene organization within MGE regions

Location: 644106..654922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKP85_RS03390 (ABKP85_03390)	-	644106..644366 (+)	261	WP_014734952.1	hypothetical protein	-
ABKP85_RS03400 (ABKP85_03400)	-	645660..646484 (+)	825	WP_011834656.1	polysaccharide deacetylase family protein	-
ABKP85_RS03405 (ABKP85_03405)	brnQ	646571..647920 (-)	1350	WP_011834657.1	branched-chain amino acid transport system II carrier protein	-
ABKP85_RS03410 (ABKP85_03410)	-	648136..648408 (-)	273	WP_011834658.1	GNAT family N-acetyltransferase	-
ABKP85_RS03415 (ABKP85_03415)	-	648412..648501 (-)	90	WP_080941974.1	(4Fe-4S)-binding protein	-
ABKP85_RS03425 (ABKP85_03425)	-	650307..650861 (-)	555	WP_011834703.1	recombinase family protein	-
ABKP85_RS03430 (ABKP85_03430)	coiA	651092..651739 (+)	648	WP_231097785.1	competence protein CoiA family protein	Machinery gene
ABKP85_RS03435 (ABKP85_03435)	pepF	651802..653607 (+)	1806	WP_014567973.1	oligoendopeptidase F	Regulator
ABKP85_RS03440 (ABKP85_03440)	-	653610..653729 (+)	120	Protein_649	O-methyltransferase	-
ABKP85_RS03445 (ABKP85_03445)	-	653716..654248 (-)	533	Protein_650	IS3 family transposase	-
ABKP85_RS03450 (ABKP85_03450)	-	654341..654922 (+)	582	WP_011669105.1	recombinase family protein	-

Sequence

Protein

• Length: 215 a.a.
• Molecular weight: 26244.70 Da
• Isoelectric Point: 9.8694

>NTDB_id=1006449 ABKP85_RS03430 WP_231097785.1 651092..651739(+) (coiA) [Lactococcus cremoris strain NZ3900]
MKRLKERKENYQVHGFTVLWLMGENLWLKDQITNLQKNLVYFSENRGFYYWELDFKTQKLRLKSLIHEDLRGKIIYLQEE
IPFGQGRLIEQLRLPFLSQKLLTIPLIVDLKLAEFIRRQLYYCSPKWLKLQEKYYQRGENLLNLTFERSFIAPLGLNLLE
VFDDEIPLHKFTQIKQNINLYYENFLINFQQNSFKAVYPPRFYAIMKKQKKDMNE

Nucleotide

• Length: 648 bp

>NTDB_id=1006449 ABKP85_RS03430 WP_231097785.1 651092..651739(+) (coiA) [Lactococcus cremoris strain NZ3900]
ATGAAACGTTTAAAAGAACGGAAAGAAAATTATCAAGTACACGGTTTTACGGTGCTTTGGCTTATGGGGGAAAATTTATG
GTTAAAAGACCAAATAACAAACCTTCAAAAAAATTTAGTCTATTTTTCAGAAAATAGAGGTTTCTATTATTGGGAATTAG
ATTTTAAAACTCAGAAGCTGAGATTGAAGTCACTGATTCATGAAGATTTGCGTGGGAAAATTATTTATTTACAAGAAGAA
ATCCCTTTTGGTCAAGGACGACTTATTGAGCAATTACGACTGCCTTTTTTATCACAAAAGTTACTGACAATACCACTTAT
TGTTGATCTTAAACTAGCGGAATTTATTCGTCGGCAACTTTATTATTGTTCACCAAAATGGTTGAAACTTCAGGAAAAAT
ATTACCAAAGAGGTGAAAATTTGTTGAATTTGACTTTTGAACGTTCTTTTATTGCGCCTTTGGGATTGAACTTACTTGAA
GTTTTTGATGATGAAATCCCTTTACATAAATTTACTCAAATTAAGCAGAATATTAATCTATATTATGAAAACTTTTTAAT
AAATTTTCAGCAAAATAGCTTTAAGGCAGTATATCCTCCCCGTTTCTATGCTATAATGAAAAAGCAGAAGAAGGATATGA
ATGAATGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	72.17	98.605	0.712
coiA	Streptococcus mitis NCTC 12261	44.444	96.279	0.428
coiA	Streptococcus pneumoniae TIGR4	43.478	96.279	0.419
coiA	Streptococcus pneumoniae Rx1	43.478	96.279	0.419
coiA	Streptococcus pneumoniae D39	43.478	96.279	0.419
coiA	Streptococcus pneumoniae R6	43.478	96.279	0.419