Detailed information NTG1006245

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABHF33_RS09365
• Genome accession: NZ_CP157355
• Coordinates: 1968464..1969654 (+)
• Length: 396 a.a.
• NCBI ID: WP_348943716.1
• Uniprot ID: A0AAU7F5W5
• Organism: Chitinibacter sp. FCG-7
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1963464..1974654

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABHF33_RS09340 (ABHF33_09340)	-	1964204..1965049 (-)	846	WP_348943711.1	hypothetical protein	-
ABHF33_RS09345 (ABHF33_09345)	-	1965036..1965902 (-)	867	WP_348943712.1	ABC transporter ATP-binding protein	-
ABHF33_RS09350 (ABHF33_09350)	-	1965899..1966261 (-)	363	WP_348943713.1	GntR family transcriptional regulator	-
ABHF33_RS09355 (ABHF33_09355)	-	1966503..1967660 (-)	1158	WP_348943714.1	iron-containing alcohol dehydrogenase	-
ABHF33_RS09360 (ABHF33_09360)	-	1967739..1968353 (-)	615	WP_348943715.1	TetR/AcrR family transcriptional regulator	-
ABHF33_RS09365 (ABHF33_09365)	pilU	1968464..1969654 (+)	1191	WP_348943716.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABHF33_RS09370 (ABHF33_09370)	secA	1969758..1972499 (-)	2742	WP_348943717.1	preprotein translocase subunit SecA	-
ABHF33_RS09375 (ABHF33_09375)	-	1972624..1973508 (-)	885	WP_348943718.1	M23 family metallopeptidase	-
ABHF33_RS09380 (ABHF33_09380)	-	1973523..1973960 (+)	438	WP_348943719.1	DciA family protein	-

Sequence

Protein

• Length: 396 a.a.
• Molecular weight: 44499.27 Da
• Isoelectric Point: 6.3462

>NTDB_id=1006245 ABHF33_RS09365 WP_348943716.1 1968464..1969654(+) (pilU) [Chitinibacter sp. FCG-7]
MNAEQALKTMHDLLRMMIQHKASDLFIADDFPPALKINGKMTPVGQQKLNAVATRALAYAIMRPDQKAEFDEEFECNFAI
SPEGIGRFRVNVFMQQEKVGMVLRTITSKIPNFDEMGLPKILKEVVMSKRGLVLLVGGTGSGKSTTMAAMIDYRNEHSHG
HIITIEDPVEYLHKNKNCLVTHREVGRDTKGWFAALKNTLRQAPDVILIGEIRDRETMEYAMNFAETGHLCMGTLHANSS
NQALERIVNFFPEERHPQLYMDLSLNMRGIISQRLVPTPDGKGRCAAIEILLNTPLVADMIFKGDVGGVKTAMQKSKELG
MQTFDMALFDLYEAGKISMEEALKNADSLNELRLKIKLNSQHHRKEEHSSGLDHLSLEVHEEPEVVEEAAEGEKKE

Nucleotide

• Length: 1191 bp

>NTDB_id=1006245 ABHF33_RS09365 WP_348943716.1 1968464..1969654(+) (pilU) [Chitinibacter sp. FCG-7]
ATGAACGCAGAACAAGCATTAAAAACCATGCACGACTTGTTGCGCATGATGATACAACACAAGGCATCCGATCTGTTTAT
CGCCGATGACTTCCCGCCCGCACTGAAAATCAACGGCAAAATGACGCCGGTTGGGCAGCAAAAGCTCAATGCGGTGGCAA
CGCGCGCGCTGGCCTACGCGATTATGCGGCCCGATCAGAAGGCCGAATTTGACGAAGAATTCGAGTGCAATTTTGCGATC
AGTCCCGAAGGCATCGGGCGTTTTCGCGTGAATGTATTTATGCAGCAGGAAAAAGTTGGCATGGTGCTCAGGACGATCAC
CAGCAAGATTCCCAATTTTGACGAAATGGGGCTGCCCAAGATTTTAAAAGAAGTCGTGATGAGCAAACGCGGGCTGGTGC
TGCTGGTGGGTGGCACGGGTTCGGGTAAATCAACGACGATGGCGGCGATGATTGATTATCGCAACGAGCACAGCCACGGC
CATATCATTACGATTGAAGATCCGGTTGAATACCTGCACAAGAATAAGAATTGCCTCGTCACACATCGCGAAGTCGGTCG
CGATACCAAGGGCTGGTTTGCCGCGCTGAAAAACACGCTGCGCCAAGCGCCCGACGTGATCCTGATTGGCGAGATTCGCG
ACCGAGAAACGATGGAATACGCGATGAACTTCGCCGAAACCGGCCACCTGTGTATGGGCACGCTGCACGCCAATAGCTCG
AATCAGGCGCTGGAGCGGATTGTGAATTTCTTCCCCGAAGAGCGCCATCCGCAGCTGTATATGGATTTGTCGCTCAATAT
GCGCGGCATTATTTCGCAACGGCTGGTGCCCACCCCGGATGGCAAAGGGCGCTGCGCGGCGATCGAGATTTTGCTCAATA
CGCCGCTGGTGGCCGATATGATTTTCAAAGGCGATGTCGGCGGTGTGAAAACGGCGATGCAAAAATCCAAAGAGCTGGGG
ATGCAGACCTTCGATATGGCGCTGTTTGATCTCTACGAAGCGGGCAAAATCAGCATGGAAGAAGCGCTGAAGAATGCCGA
CTCGCTCAATGAATTGCGGCTGAAGATCAAGCTCAATAGCCAGCATCACCGCAAGGAAGAGCACAGCAGCGGGCTGGATC
ACTTATCGCTTGAAGTGCACGAAGAGCCGGAAGTGGTGGAAGAGGCCGCTGAGGGGGAGAAGAAAGAGTAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (114-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	56.334	93.687	0.528
pilU	Acinetobacter baylyi ADP1	56.657	89.141	0.505
pilU	Vibrio cholerae strain A1552	52.113	89.646	0.467
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.323	85.101	0.369
pilT	Pseudomonas aeruginosa PAK	42.985	84.596	0.364