Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC/comC1   Type   Regulator
Locus tag   FGL23_RS10640 Genome accession   NZ_LR594049
Coordinates   2182219..2182371 (-) Length   50 a.a.
NCBI ID   WP_012131079.1    Uniprot ID   P72445
Organism   Streptococcus gordonii strain NCTC10231     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 2177219..2187371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL23_RS10610 (NCTC10231_02124) pth 2177998..2178567 (-) 570 WP_061603311.1 aminoacyl-tRNA hydrolase -
  FGL23_RS10615 (NCTC10231_02125) ychF 2178641..2179756 (-) 1116 WP_008808030.1 redox-regulated ATPase YchF -
  FGL23_RS10630 (NCTC10231_02128) comE/comE2 2180078..2180845 (-) 768 WP_008808031.1 competence system response regulator transcription factor ComE Regulator
  FGL23_RS10635 (NCTC10231_02129) comD/comD1 2180842..2182203 (-) 1362 WP_061603310.1 competence system sensor histidine kinase ComD Regulator
  FGL23_RS10640 (NCTC10231_02130) comC/comC1 2182219..2182371 (-) 153 WP_012131079.1 bacteriocin Regulator
  FGL23_RS10650 (NCTC10231_02132) rlmH 2182657..2183136 (-) 480 WP_061603309.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGL23_RS10655 (NCTC10231_02133) htrA 2183330..2184523 (+) 1194 WP_061603308.1 S1C family serine protease Regulator
  FGL23_RS10660 (NCTC10231_02134) spo0J 2184589..2185353 (+) 765 WP_061601400.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 50 a.a.        Molecular weight: 6146.21 Da        Isoelectric Point: 10.8831

>NTDB_id=1006147 FGL23_RS10640 WP_012131079.1 2182219..2182371(-) (comC/comC1) [Streptococcus gordonii strain NCTC10231]
MKKKNKQNLLPKELQQFEILTERKLEQVTGGDVRSNKIRLWWENIFFNKK

Nucleotide


Download         Length: 153 bp        

>NTDB_id=1006147 FGL23_RS10640 WP_012131079.1 2182219..2182371(-) (comC/comC1) [Streptococcus gordonii strain NCTC10231]
ATGAAAAAGAAAAACAAACAAAATCTATTGCCAAAAGAGTTACAACAATTTGAAATTTTGACAGAAAGAAAATTAGAGCA
AGTTACTGGTGGAGATGTTCGCTCAAACAAAATTAGATTATGGTGGGAAAATATATTCTTTAATAAAAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P72445

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC/comC1 Streptococcus gordonii str. Challis substr. CH1

100

100

1
  comC/comC2 Streptococcus gordonii strain NCTC7865

74

100

0.74