Detailed information NTG1005440

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: FGL16_RS00865
• Genome accession: NZ_LR594043
• Coordinates: 133131..133538 (+)
• Length: 135 a.a.
• NCBI ID: WP_014735291.1
• Uniprot ID: -
• Organism: Streptococcus suis strain NCTC10237
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 128131..138538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL16_RS00840 (NCTC10237_00163)	-	129531..129896 (+)	366	WP_014735287.1	DUF1033 family protein	-
FGL16_RS00845 (NCTC10237_00164)	-	129931..130881 (-)	951	WP_014735288.1	S66 peptidase family protein	-
FGL16_RS00850	comGA	130967..131918 (+)	952	Protein_123	competence type IV pilus ATPase ComGA	-
FGL16_RS00855 (NCTC10237_00167)	comGB	131830..132867 (+)	1038	WP_268739958.1	competence type IV pilus assembly protein ComGB	Machinery gene
FGL16_RS00860 (NCTC10237_00168)	comGC	132869..133150 (+)	282	WP_014735290.1	competence type IV pilus major pilin ComGC	Machinery gene
FGL16_RS00865 (NCTC10237_00169)	comGD	133131..133538 (+)	408	WP_014735291.1	competence type IV pilus minor pilin ComGD	Machinery gene
FGL16_RS00870 (NCTC10237_00170)	comGE	133510..133803 (+)	294	WP_024405248.1	competence type IV pilus minor pilin ComGE	Machinery gene
FGL16_RS00875 (NCTC10237_00171)	comGF/cglF	133790..134224 (+)	435	WP_014735293.1	competence type IV pilus minor pilin ComGF	Machinery gene
FGL16_RS00880 (NCTC10237_00172)	comGG	134202..134723 (+)	522	WP_014735294.1	competence type IV pilus minor pilin ComGG	-
FGL16_RS00885 (NCTC10237_00173)	comGH	134780..135733 (+)	954	WP_014735295.1	class I SAM-dependent methyltransferase	Machinery gene
FGL16_RS00890 (NCTC10237_00174)	-	135783..136970 (+)	1188	WP_012775422.1	acetate kinase	-
FGL16_RS00895 (NCTC10237_00175)	-	137285..137836 (+)	552	WP_012774908.1	folate family ECF transporter S component	-

Sequence

Protein

• Length: 135 a.a.
• Molecular weight: 15300.52 Da
• Isoelectric Point: 9.7340

>NTDB_id=1005440 FGL16_RS00865 WP_014735291.1 133131..133538(+) (comGD) [Streptococcus suis strain NCTC10237]
MLRRKNKAFTLFESLLTLLVVSFLAVSLSGTVQTVFQSVQEEIFLWEFEAVYKDSQKLAASSHQSVSLTIGEQEVTNGHQ
MVKVPRSVEVLEGKTITFEENGGNSSLTKIRFRLSRKTVTYQLYIGSGRYKKTEE

Nucleotide

• Length: 408 bp

>NTDB_id=1005440 FGL16_RS00865 WP_014735291.1 133131..133538(+) (comGD) [Streptococcus suis strain NCTC10237]
ATGCTACGGCGAAAAAATAAGGCCTTCACCCTGTTTGAAAGTCTGCTGACCTTGTTGGTTGTCAGTTTTTTAGCTGTTTC
CTTATCAGGAACAGTACAAACGGTCTTTCAGTCTGTTCAGGAAGAAATTTTTCTCTGGGAATTTGAAGCCGTTTACAAAG
ACAGTCAGAAATTGGCTGCTAGTTCTCACCAGTCAGTTAGCCTGACTATCGGCGAACAAGAAGTGACAAATGGTCATCAG
ATGGTGAAAGTACCTAGAAGTGTAGAAGTATTAGAAGGGAAGACCATCACATTTGAAGAAAATGGAGGAAATTCTTCTCT
GACCAAGATTCGTTTTCGGCTTAGTCGAAAGACAGTCACATATCAATTATATATAGGGAGTGGTCGCTATAAGAAAACAG
AAGAATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus mutans UA140	48.062	95.556	0.459
comGD	Streptococcus mutans UA159	48.062	95.556	0.459
comGD/cglD	Streptococcus pneumoniae D39	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae R6	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae Rx1	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae TIGR4	46.512	95.556	0.444
comGD	Streptococcus gordonii str. Challis substr. CH1	46.457	94.074	0.437
comGD/cglD	Streptococcus mitis NCTC 12261	45.736	95.556	0.437
comGD/cglD	Streptococcus mitis SK321	45.736	95.556	0.437
comGD	Lactococcus lactis subsp. cremoris KW2	39.062	94.815	0.37