Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   FGL04_RS11375 Genome accession   NZ_LR594035
Coordinates   1590176..1590409 (-) Length   77 a.a.
NCBI ID   WP_138069171.1    Uniprot ID   -
Organism   Streptococcus pseudoporcinus strain NCTC5385     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1585176..1595409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL04_RS08150 (NCTC5385_01776) comB 1585514..1586035 (-) 522 WP_138068838.1 HlyD family efflux transporter periplasmic adaptor subunit Regulator
  FGL04_RS08155 (NCTC5385_01778) comB 1586356..1586616 (-) 261 WP_138068839.1 hypothetical protein Regulator
  FGL04_RS08160 (NCTC5385_01779) - 1586626..1587123 (-) 498 Protein_1605 ATP-binding cassette domain-containing protein -
  FGL04_RS08165 (NCTC5385_01781) - 1587207..1588312 (+) 1106 WP_138068165.1 IS3 family transposase -
  FGL04_RS08170 (NCTC5385_01782) - 1588354..1589721 (-) 1368 Protein_1607 peptide cleavage/export ABC transporter -
  FGL04_RS10795 (NCTC5385_01783) - 1589992..1590135 (+) 144 WP_171011257.1 hypothetical protein -
  FGL04_RS11375 comD/blpH 1590176..1590409 (-) 234 WP_138069171.1 GHKL domain-containing protein Regulator
  FGL04_RS08180 (NCTC5385_01784) comD/blpH 1590370..1590996 (-) 627 WP_138068841.1 hypothetical protein Regulator
  FGL04_RS08185 comE/blpR 1591555..1591863 (-) 309 WP_333473208.1 LytTR family DNA-binding domain-containing protein Regulator
  FGL04_RS08195 (NCTC5385_01786) - 1592067..1592858 (-) 792 WP_138068842.1 hypothetical protein -
  FGL04_RS08200 (NCTC5385_01787) - 1592913..1593302 (-) 390 WP_138068843.1 hypothetical protein -
  FGL04_RS08205 (NCTC5385_01788) - 1593510..1593668 (-) 159 Protein_1614 NUDIX domain-containing protein -
  FGL04_RS08210 (NCTC5385_01789) - 1593829..1594686 (-) 858 WP_138068845.1 IS982 family transposase -
  FGL04_RS08215 (NCTC5385_01790) - 1594821..1595369 (-) 549 WP_138068846.1 TetR/AcrR family transcriptional regulator -

Sequence

Protein


Download         Length: 77 a.a.        Molecular weight: 8996.45 Da        Isoelectric Point: 10.6313

>NTDB_id=1005093 FGL04_RS11375 WP_138069171.1 1590176..1590409(-) (comD/blpH) [Streptococcus pseudoporcinus strain NCTC5385]
MICFFPRRTKKILIIENTTSIKQIDTLSIFNYGFSTKGKNRGIGLGNVKRVLDKYNNISIFTNSKNHKFTQELTFYE

Nucleotide


Download         Length: 234 bp        

>NTDB_id=1005093 FGL04_RS11375 WP_138069171.1 1590176..1590409(-) (comD/blpH) [Streptococcus pseudoporcinus strain NCTC5385]
ATTATTTGCTTTTTTCCAAGAAGAACAAAAAAAATACTAATTATAGAGAATACAACATCTATTAAACAAATTGATACTCT
TAGTATTTTCAATTATGGATTTAGTACGAAGGGAAAAAATAGAGGGATAGGTTTAGGAAATGTAAAAAGAGTACTTGACA
AGTATAATAATATCAGTATTTTTACTAACAGTAAGAACCATAAGTTTACTCAAGAATTAACTTTTTATGAATAA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(8-74)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

43.056

93.506

0.403
  comD/comD3 Streptococcus equinus JB1

42.466

94.805

0.403
  comD/comD1 Streptococcus pneumoniae Rx1

42.647

88.312

0.377
  comD/comD1 Streptococcus pneumoniae D39

42.647

88.312

0.377
  comD/comD1 Streptococcus pneumoniae R6

42.647

88.312

0.377
  comD/comD2 Streptococcus pneumoniae TIGR4

39.189

96.104

0.377
  comD Streptococcus mitis NCTC 12261

39.189

96.104

0.377
  comD Streptococcus mitis SK321

39.189

96.104

0.377

Multiple sequence alignment