Detailed information NTG1003003

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABEF79_RS07960
• Genome accession: NZ_CP156810
• Coordinates: 1625965..1627143 (-)
• Length: 392 a.a.
• NCBI ID: WP_034588275.1
• Uniprot ID: -
• Organism: Acinetobacter sp. ANC 7454
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1620965..1632143

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF79_RS07940 (ABEF79_07940)	-	1621498..1622526 (+)	1029	WP_034588270.1	AraC family transcriptional regulator	-
ABEF79_RS07945 (ABEF79_07945)	gcvH	1622599..1622973 (+)	375	WP_034588271.1	glycine cleavage system protein GcvH	-
ABEF79_RS07950 (ABEF79_07950)	-	1623210..1624403 (+)	1194	WP_347456829.1	MFS transporter	-
ABEF79_RS07955 (ABEF79_07955)	pilU	1624454..1625659 (-)	1206	WP_347456828.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF79_RS07960 (ABEF79_07960)	pilU	1625965..1627143 (-)	1179	WP_034588275.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF79_RS07965 (ABEF79_07965)	-	1627356..1628405 (-)	1050	WP_034588278.1	3-deoxy-7-phosphoheptulonate synthase	-
ABEF79_RS07970 (ABEF79_07970)	-	1629178..1630287 (-)	1110	WP_034588280.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
ABEF79_RS07975 (ABEF79_07975)	-	1630410..1631966 (+)	1557	WP_034588284.1	phospholipase D family protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44232.69 Da
• Isoelectric Point: 6.1884

>NTDB_id=1003003 ABEF79_RS07960 WP_034588275.1 1625965..1627143(-) (pilU) [Acinetobacter sp. ANC 7454]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADYPPSIKQQGLMKPFGQQKLTADKTKLFAYSLMNQRQIQEFESIMEC
NFSMSVPDVARFRVNVFQQQHNVGMVIRSVSTDIPSFEQLGLPYSLKKVIMEKRGLVLIVGATGVGKSTTLAAMLDHRNA
NTEGHIITVEDPVEYVYQHKKSMITQREIGVDCVSWHNALLNAMRQAPDVIAIGEIRDTESMEHAIAFAETGHLCVATLH
SSNADQALDRIINFFPEERRNQLLLDLSANLKAVISQRLIRTEDGKGRRAAVELLLNTPLVSDYIRKGELYELKGIMQKS
REQGMQTFDQALFDLYNDGLISYEEALCNADSSNELRLQIKLKSGRINPALQEEGGNMTILEQSKETLLSRS

Nucleotide

• Length: 1179 bp

>NTDB_id=1003003 ABEF79_RS07960 WP_034588275.1 1625965..1627143(-) (pilU) [Acinetobacter sp. ANC 7454]
ATGTATACTCCTGAACTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTCACTAAAGTGGTGGAATATGGCGGCTC
AGACCTATTTATTACTGCAGATTACCCACCGAGTATTAAACAGCAAGGGCTGATGAAGCCTTTTGGTCAGCAGAAACTCA
CGGCAGATAAAACCAAATTGTTTGCTTATTCTTTAATGAACCAGCGTCAGATTCAGGAATTTGAATCCATTATGGAATGC
AATTTCAGCATGAGTGTACCTGATGTTGCCCGTTTCCGCGTCAATGTTTTTCAGCAACAGCATAACGTCGGTATGGTCAT
CCGAAGTGTCAGCACAGATATTCCAAGCTTTGAGCAACTTGGACTGCCATATTCGTTAAAAAAAGTGATTATGGAAAAAC
GCGGCTTAGTCCTCATTGTGGGGGCAACGGGGGTAGGTAAATCCACGACTTTGGCTGCAATGCTGGATCATCGAAATGCC
AATACTGAAGGGCATATCATTACTGTAGAAGACCCGGTGGAATATGTTTATCAGCATAAAAAATCCATGATTACCCAGCG
TGAGATTGGGGTGGATTGTGTGTCCTGGCATAATGCCTTGCTGAATGCCATGCGTCAGGCACCAGATGTAATTGCTATTG
GTGAAATCCGCGATACTGAGAGTATGGAGCATGCGATTGCTTTTGCTGAAACCGGACATCTGTGTGTAGCAACACTGCAT
TCAAGTAATGCGGATCAGGCTCTAGACCGGATTATTAACTTCTTCCCGGAAGAGCGCCGGAATCAGTTATTGTTGGACTT
ATCAGCCAATCTTAAAGCGGTCATTTCACAACGTCTGATTCGGACGGAAGATGGTAAAGGCCGCCGTGCTGCAGTAGAGT
TGTTATTAAATACGCCGCTGGTCTCAGATTATATCCGTAAGGGTGAACTTTATGAGCTGAAAGGTATTATGCAGAAATCG
CGTGAACAGGGCATGCAAACCTTTGATCAGGCACTATTTGACCTTTATAACGATGGTTTGATTTCCTATGAAGAAGCACT
GTGCAATGCGGATTCCAGTAACGAATTACGTTTGCAAATCAAATTAAAGAGCGGTCGCATCAATCCCGCCCTTCAGGAAG
AAGGTGGAAATATGACCATACTGGAACAGTCTAAAGAAACGTTACTATCAAGAAGTTAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (52-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.184	88.776	0.508
pilU	Acinetobacter baylyi ADP1	55.331	88.52	0.49
pilU	Vibrio cholerae strain A1552	51.261	91.071	0.467
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.647	86.735	0.37