Detailed information NTG1003002

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABEF79_RS07955
• Genome accession: NZ_CP156810
• Coordinates: 1624454..1625659 (-)
• Length: 401 a.a.
• NCBI ID: WP_347456828.1
• Uniprot ID: -
• Organism: Acinetobacter sp. ANC 7454
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1619454..1630659

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF79_RS07935 (ABEF79_07935)	-	1620897..1621346 (+)	450	WP_034588266.1	MaoC family dehydratase	-
ABEF79_RS07940 (ABEF79_07940)	-	1621498..1622526 (+)	1029	WP_034588270.1	AraC family transcriptional regulator	-
ABEF79_RS07945 (ABEF79_07945)	gcvH	1622599..1622973 (+)	375	WP_034588271.1	glycine cleavage system protein GcvH	-
ABEF79_RS07950 (ABEF79_07950)	-	1623210..1624403 (+)	1194	WP_347456829.1	MFS transporter	-
ABEF79_RS07955 (ABEF79_07955)	pilU	1624454..1625659 (-)	1206	WP_347456828.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF79_RS07960 (ABEF79_07960)	pilU	1625965..1627143 (-)	1179	WP_034588275.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF79_RS07965 (ABEF79_07965)	-	1627356..1628405 (-)	1050	WP_034588278.1	3-deoxy-7-phosphoheptulonate synthase	-
ABEF79_RS07970 (ABEF79_07970)	-	1629178..1630287 (-)	1110	WP_034588280.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 45309.61 Da
• Isoelectric Point: 6.2361

>NTDB_id=1003002 ABEF79_RS07955 WP_347456828.1 1624454..1625659(-) (pilU) [Acinetobacter sp. ANC 7454]
MFTAELLEEARKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQNLTADKTKLFAYALMNEKQRQEYETELEC
NFAITVPGVSRFRVNVFQQQLNVGMVIRTITAEIPNFQKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTQDGQGRRAAVEIMLNTPLISDLILKGDFHELKAIMAKS
RELGMQTFDQALFDLYNEGAISYEEALRNADSTNELHLQIKLKSSRANPELNNNPTSFSMVEEKKPEDEADGESKTEEQT
S

Nucleotide

• Length: 1206 bp

>NTDB_id=1003002 ABEF79_RS07955 WP_347456828.1 1624454..1625659(-) (pilU) [Acinetobacter sp. ANC 7454]
ATGTTCACGGCAGAGTTATTAGAAGAAGCACGTAAATTTATGCACCATATGCTCACCAAAGTGGTGGAATATGGTGGTTC
GGATTTATTTATTACTGCCGACTTTCCACCGAGTATCAAACATCAGGGGCTGATGAAACCTTTTGGTCAGCAAAACCTAA
CTGCAGATAAAACCAAGCTGTTTGCTTATGCGTTGATGAATGAAAAACAGCGTCAGGAATACGAAACTGAGCTGGAATGT
AACTTTGCCATTACCGTGCCGGGTGTTTCCCGTTTCCGTGTCAATGTTTTTCAGCAACAGCTCAATGTAGGAATGGTGAT
CCGTACCATTACTGCAGAAATTCCGAACTTCCAGAAACTGAAATTACCTGAATCACTCAAACATGTGATTATGGAAAAAC
GCGGGCTAGTATTGGTTGTTGGGGGGACTGGGTCTGGTAAATCGACCTCACTGGCAGCGATGATTGATTACCGGAATGAA
AATTCCGCCGGACATATCATTACCGTAGAAGATCCGGTGGAATATGTGCATAAGCATAAAAAGTCCATGATCACCCACCG
TGAAGTCGGTGTAGACAGCCACTCCTGGCACAATGCGCTAAAAAATACCCTACGTCAGGCGCCGGATGTGATTCTGATTG
GCGAGATCCGTGATACCGAAACCATGGAACACGCGATTGCCTTTGCCGAAACTGGACACTTATGTCTAGGAACACTACAT
GCCAACAACGCCAACCAGACTTTGGATCGGATTATTAACTTCTTCCCGGAAGAGCGCCGTAATCAGTTGTTGATGGATCT
GTCTTCCAATATGAAAGCCATTATTTCCCAGCGTCTAATTCGTACTCAAGATGGTCAAGGCCGTCGTGCAGCAGTGGAGA
TCATGTTAAATACGCCGCTGATTTCTGACCTGATTTTAAAAGGCGATTTCCATGAGTTGAAAGCAATTATGGCCAAATCC
CGTGAACTCGGTATGCAGACTTTCGATCAGGCACTGTTCGACTTGTACAACGAAGGGGCGATTTCTTATGAAGAGGCACT
ACGTAATGCAGATTCAACTAATGAATTGCATTTACAAATTAAACTAAAAAGTAGTCGAGCTAATCCTGAGCTGAATAATA
ATCCTACTTCATTCAGTATGGTTGAAGAAAAAAAGCCGGAAGATGAAGCTGATGGCGAAAGCAAGACTGAAGAACAGACT
TCTTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (116-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	59.77	86.783	0.519
pilU	Acinetobacter baylyi ADP1	56.145	89.277	0.501
pilU	Vibrio cholerae strain A1552	52.113	88.529	0.461